ggKbase home page

S28_scaffold_456_curated

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_456_curated_1
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1..504)
DNA (504bp) protein (168aa)
OMF family outer membrane protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AG24_IGNAJ
OMF family outer membrane protein
OMF family outer membrane protein {ECO:0000313|EMBL:AFH47931.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_456_curated_2
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(828..2138)
DNA (1311bp) protein (437aa)
ial:IALB_2672 gltA; Citrate synthase; K01647 citrate synthase [EC:2.3.3.1] id=717547 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
gltA; Citrate synthase rbh
Citrate synthase {ECO:0000313|EMBL:AFH50375.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_456_curated_3
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2340..3698)
DNA (1359bp) protein (453aa)
Putative RNA-processing exonuclease n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AN17_IGNAJ rbh
RNA-processing exonuclease rbh
Putative RNA-processing exonuclease {ECO:0000313|EMBL:AFH50374.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_456_curated_4
Aureococcus anophagefferens, Aureococcus, Pelagomonadales, Pelagophyceae, Eukaryota

Not on your lists

comp(3890..5278)
DNA (1389bp) protein (463aa)
Putative uncharacterized protein n=1 Tax=Aureococcus anophagefferens RepID=F0YG03_AURAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGB05804.1}; TaxID=44056 species="Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus.;" source="Aureococcus anophagefferens (Harmful bloom alga).;"
fibronectin type III domain-containing protein
S28_scaffold_456_curated_5
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5318..6604)
DNA (1287bp) protein (429aa)
OmpA family protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F1F9_9DELT rbh
OmpA family protein {ECO:0000313|EMBL:EFK10394.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
peptidoglycan-associated (lipo)protein-like protein rbh
S28_scaffold_456_curated_6
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(6629..7165)
DNA (537bp) protein (179aa)
hypothetical protein id=717721 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Tax=BJP_IG2102_Ignavibacteriales_35_8
S28_scaffold_456_curated_7
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7231..8466)
DNA (1236bp) protein (412aa)
BNR/Asp-box repeat-containing protein id=720302 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
BNR/Asp-box repeat-containing protein
Tax=GWA2_Ignavibacteria_54_16_curated
S28_scaffold_456_curated_8
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8577..9218)
DNA (642bp) protein (214aa)
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
S28_scaffold_456_curated_9
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9558..13769)
DNA (4212bp) protein (1404aa)
Signal transduction histidine kinase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0APH8_IGNAJ rbh
Signal transduction histidine kinase rbh
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
S28_scaffold_456_curated_10
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13928..14965)
DNA (1038bp) protein (346aa)
5'-nucleotidase id=717840 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
subtilisin-like serine protease
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
S28_scaffold_456_curated_11
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15110..15748)
DNA (639bp) protein (213aa)
hypothetical protein id=717544 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
S28_scaffold_456_curated_12
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15759..16175)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI0003676205
hypothetical protein
Tax=RBG_16_Ignavibacteria_36_9_curated
S28_scaffold_456_curated_13
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(16188..16373)
DNA (186bp) protein (62aa)
ial:IALB_2668 DNA modification methylase id=717543 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
DNA modification methylase
Tax=RBG_16_Ignavibacteria_36_9_curated
Displaying 13 items

View Taxonomy