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S28_scaffold_313_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_313_curated_1
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3..722
DNA (720bp) protein (240aa)
Putative aminopeptidase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AFV2_IGNAJ
aminopeptidase
Putative aminopeptidase {ECO:0000313|EMBL:AFH47859.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_313_curated_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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784..2298
DNA (1515bp) protein (505aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026A5_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83164.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
S28_scaffold_313_curated_3
unknown

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comp(2433..2858)
DNA (426bp) protein (142aa)

This feature has no annotations

S28_scaffold_313_curated_4
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(2979..4562)
DNA (1584bp) protein (528aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI0003811D7C rbh
glutamate synthase-like protein rbh
Tax=RBG_16_Ignavibacteria_35_7_curated
S28_scaffold_313_curated_5
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4583..5260)
DNA (678bp) protein (226aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein id=2267821 bin=GWB2_Ignavibacteria_35_12 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
ferredoxin
Tax=RBG_16_Ignavibacteria_35_7_curated
S28_scaffold_313_curated_6
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(5253..8426)
DNA (3174bp) protein (1058aa)
NADH:ubiquinone oxidoreductase, NADH-binding subunit (NuoF-like) id=2267820 bin=GWB2_Ignavibacteria_35_12 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
respiratory-chain NADH dehydrogenase domain 51 kDa subunit rbh
Tax=RBG_16_Ignavibacteria_35_7_curated
S28_scaffold_313_curated_7
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(8469..9317)
DNA (849bp) protein (283aa)
ndufv2; NADH dehydrogenase [ubiquinone] flavoprotein 2 (EC:1.6.5.3 1.6.99.3)
[Fe] hydrogenase, HymA subunit, putative id=2267819 bin=GWB2_Ignavibacteria_35_12 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
Tax=RBG_16_Ignavibacteria_35_7_curated
S28_scaffold_313_curated_8
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(9621..10868)
DNA (1248bp) protein (416aa)
Glutamate dehydrogenase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGA3_IGNAJ rbh
NAD(P)-dependent glutamate dehydrogenase rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_313_curated_9
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(10874..11074)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGA4_IGNAJ
hypothetical protein
Tax=RBG_16_Ignavibacteria_35_7_curated
S28_scaffold_313_curated_10
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(11100..14096)
DNA (2997bp) protein (999aa)
Response regulator n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGA5_IGNAJ rbh
response regulator rbh
Response regulator {ECO:0000313|EMBL:AFH48012.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_313_curated_11

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14405..16474
DNA (2070bp) protein (690aa)
hypothetical protein id=718324 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
Cell surface protein {ECO:0000313|EMBL:AAU43714.1}; TaxID=285359 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos26D8.;"
fibronectin type III domain-containing protein
S28_scaffold_313_curated_12
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(16604..17734)
DNA (1131bp) protein (377aa)
Glutamate dehydrogenase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGA6_IGNAJ rbh
gdhA; NADP-dependent glutamate dehydrogenase rbh
Tax=RBG_16_Ignavibacteria_35_7_curated
Displaying 12 items

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