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S28_scaffold_3822_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_3822_curated_1
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1..543
DNA (543bp) protein (181aa)
DNA polymerase III subunit delta n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AHB2_IGNAJ
holA; DNA polymerase III subunit delta
Tax=GWC2_Ignavibacteria_rel_36_12_curated
S28_scaffold_3822_curated_2

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635..1219
DNA (585bp) protein (195aa)
Marine sediment metagenome DNA, contig: S01H4_L02512 {ECO:0000313|EMBL:GAG71090.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ECF subfamily RNA polymerase sigma-70 factor id=4020120 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
rpoE; ECF subfamily RNA polymerase sigma-70 factor
S28_scaffold_3822_curated_3
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1235..1975
DNA (741bp) protein (247aa)
transmembrane_regions id=718301 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
S28_scaffold_3822_curated_4
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2107..2367
DNA (261bp) protein (87aa)
rpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 id=718300 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
rpmE; 50S ribosomal protein L31
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_3822_curated_5
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2485..3555
DNA (1071bp) protein (357aa)
rsi:Runsl_5627 RND family efflux transporter MFP subunit id=718299 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
RND family efflux transporter MFP subunit rbh
Tax=GWC2_Ignavibacteria_rel_36_12_curated
S28_scaffold_3822_curated_6
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3564..5735
DNA (2172bp) protein (724aa)
rmg:Rhom172_1964 acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=718298 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
acriflavin resistance protein rbh
Tax=CG_Ignavi_02
Displaying 6 items

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