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S28_scaffold_17_curated

Search features with annotation key words

Displaying items 1-30 of 242 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_17_curated_1
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1..510)
DNA (510bp) protein (170aa)
Outer membrane adhesin like proteiin id=4827601 bin=GWA2_Ignavibacteriae_55_25 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
S28_scaffold_17_curated_2
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(607..1902)
DNA (1296bp) protein (432aa)
transmembrane_regions id=719836 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
long-chain fatty acid transport protein
Tax=RBG_16_Ignavibacteria_34_14_curated
S28_scaffold_17_curated_3
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1932..2894)
DNA (963bp) protein (321aa)
seg id=719837 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
Tax=RBG_16_Ignavibacteria_34_14_curated
S28_scaffold_17_curated_4
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2923..4290)
DNA (1368bp) protein (456aa)
Uncharacterized protein id=4432113 bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria rbh
hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
S28_scaffold_17_curated_5
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4274..5122)
DNA (849bp) protein (283aa)
putative sugar ABC transporter permease; K02026 multiple sugar transport system permease protein id=719840 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
S28_scaffold_17_curated_6
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5119..6045)
DNA (927bp) protein (309aa)
Binding-protein-dependent transport systems inner membrane component id=4432109 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria rbh
binding-protein-dependent transport system inner membrane protein rbh
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
S28_scaffold_17_curated_7
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(6051..7358)
DNA (1308bp) protein (436aa)
sugar binding protein id=4432107 bin=GWF2_Ignavibacteria_35_20 species=Thermococcus zilligii genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria rbh
sugar binding protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
S28_scaffold_17_curated_8
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7490..8539)
DNA (1050bp) protein (350aa)
UniRef90_UPI00029B134C transcriptional regulator n=1 Tax=Marinilabilia salmonicolor JCM 21150 RepID=UPI00029B134C id=719844 bin=RAAC39 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RAAC39 organism_group=Ignavibacteria rbh
transcriptional regulator rbh
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
S28_scaffold_17_curated_trna_2
unknown

Not on your lists

comp(9022..9108)
DNA (87bp)
transferRNA Ser
S28_scaffold_17_curated_9
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

9222..9977
DNA (756bp) protein (252aa)
ial:IALB_2939 Fructose-1,6-bisphosphatase-like protein id=717235 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
Fructose-1,6-bisphosphatase-like protein rbh
Tax=CG_Ignavi_02
S28_scaffold_17_curated_10
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9974..10738)
DNA (765bp) protein (255aa)
hypothetical protein id=717236 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
S28_scaffold_17_curated_11
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10848..12020)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANT3_IGNAJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFH50640.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_17_curated_12
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12040..12984)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANT2_IGNAJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFH50639.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_17_curated_13
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12996..13979)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANT1_IGNAJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFH50638.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_17_curated_14
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

14397..15869
DNA (1473bp) protein (491aa)
Glycosidase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANT0_IGNAJ rbh
glycosidase rbh
Glycosidase {ECO:0000313|EMBL:AFH50637.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_17_curated_15
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

15955..16173
DNA (219bp) protein (73aa)
hypothetical protein id=717242 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
S28_scaffold_17_curated_16
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

16193..16741
DNA (549bp) protein (183aa)
Thiol-disulfide isomerase-like protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANS8_IGNAJ
thiol-disulfide isomerase-like protein
Thiol-disulfide isomerase-like protein {ECO:0000313|EMBL:AFH50635.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_17_curated_17
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

16780..17166
DNA (387bp) protein (129aa)
Response regulator receiver domain protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A3V5_MELRP
response regulator receiver domain protein
Tax=CG_Ignavi_02
S28_scaffold_17_curated_18
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(17177..18220)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANS6_IGNAJ rbh
hypothetical protein rbh
Tax=RBG_16_Ignavibacteria_34_14_curated
S28_scaffold_17_curated_19
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

18302..19108
DNA (807bp) protein (269aa)
Protein-L-isoaspartate O-methyltransferase id=3660430 bin=GWF2_Ignavibacteria_35_20 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria rbh
protein-L-isoaspartate O-methyltransferase
Tax=RBG_16_Ignavibacteria_36_9_curated
S28_scaffold_17_curated_20
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

19105..21504
DNA (2400bp) protein (800aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S1W5_9FLAO rbh
spermidine synthase-like protein rbh
Tax=RBG_16_Ignavibacteria_36_9_curated
S28_scaffold_17_curated_21
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

21507..22409
DNA (903bp) protein (301aa)
Fe-S protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AP99_IGNAJ rbh
Fe-S protein rbh
Fe-S protein {ECO:0000313|EMBL:AFH50806.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
S28_scaffold_17_curated_22
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

22556..23251
DNA (696bp) protein (232aa)
Transcriptionl regulator, Crp/Fnr family n=1 Tax=Desulfobacula toluolica Tol2 RepID=K0NNY5_DESTT id=719616 bin=RAAC39 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC39 organism_group=Ignavibacteria rbh
Transcriptional regulator, Crp/Fnr family
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
S28_scaffold_17_curated_23
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

23396..23623
DNA (228bp) protein (76aa)
hypothetical protein id=719615 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=CG_Ignavi_01
S28_scaffold_17_curated_24
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

23647..24219
DNA (573bp) protein (191aa)
Putative uncharacterized protein id=3956892 bin=GWF2_Ignavibacteria_35_20 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_35_7_curated
S28_scaffold_17_curated_25
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

24216..25481
DNA (1266bp) protein (422aa)
Putative uncharacterized protein id=3956891 bin=GWF2_Ignavibacteria_35_20 species=Sulfurospirillum deleyianum genus=Sulfurospirillum taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria rbh
hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
S28_scaffold_17_curated_26
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

25486..25782
DNA (297bp) protein (99aa)
Uncharacterized protein id=3956890 bin=GWF2_Ignavibacteria_35_20 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
FeS assembly SUF system protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
S28_scaffold_17_curated_27
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

25850..26080
DNA (231bp) protein (77aa)
Ferredoxin id=719612 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
4Fe-4S ferredoxin
Tax=CG_Ignavi_01
S28_scaffold_17_curated_28
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26141..26926
DNA (786bp) protein (262aa)
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:KGD68506.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
CDP-alcohol phosphatidyltransferase id=2918872 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes rbh
CDP-alcohol phosphatidyltransferase
S28_scaffold_17_curated_29
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

27004..27393
DNA (390bp) protein (130aa)
hypothetical protein id=720344 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Cupin domain
Cupin domain {ECO:0000313|EMBL:AHY45851.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
Displaying items 1-30 of 242 in total

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