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S28_scaffold_655_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_655_curated_1
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(667..1701)
DNA (1035bp) protein (345aa)
Cell surface glycoprotein (S-layer protein) n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) PF2_METAC">RepID=Q8TPF2_METAC rbh
Uncharacterized protein {ECO:0000313|EMBL:AKB78389.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
cell surface glycoprotein (S-layer protein) rbh
S28_scaffold_655_curated_2
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2327..3025)
DNA (699bp) protein (233aa)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3) rbh
Phosphoribosylformylglycinamidine synthase 1 n=2 Tax=Methanosarcina mazei RepID=PURQ_METMA rbh
S28_scaffold_655_curated_3
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3114..3365)
DNA (252bp) protein (84aa)
phosphoribosylformylglycinamidine synthase subunit PurS (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPE9_METAC
S28_scaffold_655_curated_4
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5186..6103
DNA (918bp) protein (306aa)
Asparagine synthetase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PTB2_METMA rbh
Asparagine synthase {ECO:0000313|EMBL:KKH45435.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
S28_scaffold_655_curated_5
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6295..7011
DNA (717bp) protein (239aa)
CODH nickel-insertion accessory protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPE6_METAC rbh
Cobalamin biosynthesis protein CobN {ECO:0000313|EMBL:KKH59782.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
cooC; CODH nickel-insertion accessory protein rbh
S28_scaffold_655_curated_6
Methanosarcina sp. 2.H.T.1A.15, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7115..7690)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPE5_METAC rbh
Uncharacterized protein {ECO:0000313|EMBL:KKG18829.1}; TaxID=1483596 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.15.;"
hypothetical protein rbh
S28_scaffold_655_curated_7
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7899..9146)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPE3_METAC rbh
Uncharacterized protein {ECO:0000313|EMBL:KKH98814.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;"
hypothetical protein
S28_scaffold_655_curated_8
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9303..9830)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPE2_METAC
Uncharacterized protein {ECO:0000313|EMBL:AKB78081.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein
Displaying 8 items

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