ggKbase home page

S28_scaffold_778_curated

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_778_curated_1
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


714..1466
DNA (753bp) protein (251aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20) rbh
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=SYFA_METAC rbh
Phenylalanyl-tRNA synthetase subunit alpha {ECO:0000313|EMBL:KKG22234.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.8.;"
S28_scaffold_778_curated_2
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1858..2190
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PWV8_METMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKF98532.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei (Methanosarcina frisia).;"
S28_scaffold_778_curated_3
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2931..3710
DNA (780bp) protein (260aa)
Class H tetracycline resistance efflux protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUA4_METAC rbh
MFS transporter {ECO:0000313|EMBL:KKH94380.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;"
class H tetracycline resistance efflux protein rbh
S28_scaffold_778_curated_4
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3815..4267
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MD89_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKB26571.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
hypothetical protein
S28_scaffold_778_curated_5
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4507..4725
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUA5_METAC
Uncharacterized protein {ECO:0000313|EMBL:KKG11481.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
hypothetical protein
S28_scaffold_778_curated_6
Methanosarcina sp. 2.H.T.1A.15, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4875..5420)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUA6_METAC rbh
Uncharacterized protein {ECO:0000313|EMBL:KKG14872.1}; TaxID=1483596 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.15.;"
hypothetical protein rbh
S28_scaffold_778_curated_7
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5730..8036)
DNA (2307bp) protein (769aa)
Lead, cadmium, zinc and mercury transporting ATPase {ECO:0000313|EMBL:AKB80435.1}; EC=3.6.3.3 {ECO:0000313|EMBL:AKB80435.1};; EC=3.6.3.4 {ECO:0000313|EMBL:AKB80435.1};; EC=3.6.3.5 {ECO:0000313|EMBL:AKB80435.1};; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
Lead, cadmium, zinc and mercury transporting ATPase (EC:3.6.3.3 3.6.3.5 3.6.3.4)
Copper P-type ATPase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TUA7_METAC rbh
S28_scaffold_778_curated_8
unknown

Not on your lists

8236..8388
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 8 items

View Taxonomy