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S28_scaffold_1280_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_1280_curated_1
Methanosarcina sp. 2.H.T.1A.15, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3..233
DNA (231bp) protein (77aa)
Single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1QK92_METMZ
Recombinase RecJ {ECO:0000313|EMBL:KKG13948.1}; TaxID=1483596 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.15.;"
S28_scaffold_1280_curated_2
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(359..1117)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVJ4_METMA rbh
NrpR transcriptional repressor {ECO:0000313|EMBL:KKG26037.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.8.;"
hypothetical protein rbh
S28_scaffold_1280_curated_3
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1338..2081)
DNA (744bp) protein (248aa)
Glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=2 Tax=Methanosarcina mazei RepID=M1PYH3_METMZ rbh
Glucose-6-phosphate isomerase {ECO:0000313|EMBL:KKH48442.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
S28_scaffold_1280_curated_4
Methanosarcina sp. 2.H.T.1A.15, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2298..3047)
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1Q500_METMZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KKG13951.1}; TaxID=1483596 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.15.;"
hypothetical protein
S28_scaffold_1280_curated_5
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3581..4504
DNA (924bp) protein (308aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487};; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
malate dehydrogenase (EC:1.1.1.37) rbh
Malate dehydrogenase n=2 Tax=Methanosarcina mazei RepID=MDH_METMA rbh
S28_scaffold_1280_curated_6
Methanosarcina sp. WH1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5039..5296
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSH8_METAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB22860.1}; TaxID=1434102 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WH1.;"
S28_scaffold_1280_curated_7
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5317..6048
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PVJ9_METMA rbh
tRNAHis-5'-guanylyltransferase {ECO:0000313|EMBL:AKB79880.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
hypothetical protein rbh
S28_scaffold_1280_curated_8
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6087..6392
DNA (306bp) protein (102aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02008, ECO:0000256|SAAS:SAAS00011232}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02008, ECO:0000256|SAAS:SAAS00011232};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02008}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=SYY_METAC
Displaying 8 items

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