ggKbase home page

S28_scaffold_1619_curated

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_1619_curated_1
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2..229
DNA (228bp) protein (76aa)
Isopentenyl phosphate kinase {ECO:0000256|PIRNR:PIRNR016496}; Short=IPK {ECO:0000256|PIRNR:PIRNR016496};; EC=2.7.4.26 {ECO:0000256|PIRNR:PIRNR016496};; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
Isopentenyl phosphate kinase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PW38_METMA
kinase
S28_scaffold_1619_curated_2
Methanosarcina sp. 2.H.T.1A.8, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

226..1323
DNA (1098bp) protein (366aa)
idi; isopentenyl pyrophosphate isomerase (EC:5.3.3.2) rbh
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=IDI2_METAC rbh
Isopentenyl pyrophosphate isomerase {ECO:0000313|EMBL:KKG26430.1}; TaxID=1483598 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.8.;"
S28_scaffold_1619_curated_3
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2987..4330
DNA (1344bp) protein (448aa)
Metallo-beta-lactamase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT34_METAC rbh
Ribonuclease J {ECO:0000313|EMBL:KKG10889.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
Putative Zn-dependent hydrolase in polyisoprenoid biosynthetic cluster
S28_scaffold_1619_curated_4
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4361..5332
DNA (972bp) protein (324aa)
Bifunctional short chain isoprenyl diphosphate synthase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT33_METAC rbh
Phosphoesterase {ECO:0000313|EMBL:KKH95385.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.T.1A.1.;"
idsA; bifunctional short chain isoprenyl diphosphate synthase rbh
Displaying 4 items

View Taxonomy