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S28_scaffold_660_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_660_curated_1
GWB1_Spirochaetes_48_6_curated, Spirochaetes, Bacteria

Not on your lists

comp(126..983)
DNA (858bp) protein (286aa)
Integrase catalytic region n=4 Tax=Spirochaeta RepID=E1R9F4_SPISS
Integrase catalytic subunit
Tax=GWB1_Spirochaetes_48_6_curated
S28_scaffold_660_curated_2
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(1471..1941)
DNA (471bp) protein (157aa)
Transposase n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UIR8_SPIAZ
transposase
Tax=BJP_08E140C01_Spirochaeta_53_29
S28_scaffold_660_curated_3
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

2104..2562
DNA (459bp) protein (153aa)
PTS system IIA component, fructose subfamily id=3636810 bin=GWA1_Treponema_62_8 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
putative PTS IIA-like nitrogen-regulatory protein PtsN
Tax=GWC1_Treponema_61_84_curated
S28_scaffold_660_curated_4
unknown

Not on your lists

2820..2993
DNA (174bp) protein (58aa)

This feature has no annotations

S28_scaffold_660_curated_5
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

comp(3013..4461)
DNA (1449bp) protein (483aa)
Methyl-accepting chemotaxis protein n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WKG4_9SPIO
Methyl-accepting chemotaxis protein
Tax=GWD1_Spirochaetes_27_9_curated
S28_scaffold_660_curated_6
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

5531..6508
DNA (978bp) protein (326aa)
Related to dihydroorotate dehydrogenase id=1301869 bin=GWE1_Spirochaete_60_18 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes rbh
Putative dihydropyrimidine dehydrogenase [NADP+], similar to dihydroorotate dehydrogenase
Tax=GWB1_Spirochaetes_60_80_curated
S28_scaffold_660_curated_7
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(6555..7295)
DNA (741bp) protein (247aa)
id=2653539 bin=GWB1_Spirochaetes_59_5 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_660_curated_8
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

7451..9172
DNA (1722bp) protein (574aa)
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3) rbh
Long-chain-fatty-acid--CoA ligase id=1287669 bin=GWE1_Spirochaete_60_18 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_660_curated_9
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(9675..10925)
DNA (1251bp) protein (417aa)
Adenylate cyclase id=2730812 bin=GWF1_Spirochaetes_60_12 species=Agrobacterium vitis genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes rbh
adenylate/guanylate cyclase
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_660_curated_10
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

11102..12346
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LMZ8_TREBD
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_660_curated_11
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

12381..13478
DNA (1098bp) protein (366aa)
Putative uncharacterized protein id=3229798 bin=GWB1_Spirochaetes_59_5 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
hypothetical protein rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_660_curated_12
unknown

Not on your lists

13515..13631
DNA (117bp) protein (39aa)

This feature has no annotations

S28_scaffold_660_curated_13
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

13588..14247
DNA (660bp) protein (220aa)
monosaccharide-transporting ATPase (EC:3.6.3.17) rbh
Monosaccharide-transporting ATPase id=3229800 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_660_curated_14
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

14240..14527
DNA (288bp) protein (96aa)
ABC-type transporter, integral membrane subunit id=3229802 bin=GWB1_Spirochaetes_59_5 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
ABC transporter permease
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_660_curated_15
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

14475..14861
DNA (387bp) protein (129aa)
ABC-type transporter, integral membrane subunit id=3229802 bin=GWB1_Spirochaetes_59_5 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
ABC transporter permease
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_660_curated_16
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

14831..15058
DNA (228bp) protein (76aa)
ABC-type transporter, integral membrane subunit id=3229802 bin=GWB1_Spirochaetes_59_5 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
ABC transporter
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_660_curated_17
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

15055..15384
DNA (330bp) protein (110aa)
ABC transporter integral membrane protein id=3229805 bin=GWB1_Spirochaetes_59_5 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
ABC transporter permease
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_660_curated_18
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

15706..16161
DNA (456bp) protein (152aa)
Putative uncharacterized protein id=3229808 bin=GWB1_Spirochaetes_59_5 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
Displaying 18 items

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