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S28_scaffold_194_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S28_scaffold_194_curated_1
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(3..731)
DNA (729bp) protein (243aa)
amidohydrolase (EC:3.5.1.14)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000371C5A6
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_194_curated_2
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(751..1806)
DNA (1056bp) protein (352aa)
Ornithine cyclodeaminase/mu-crystallin family protein n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8DEQ5_9BACL rbh
Ornithine cyclodeaminase/mu-crystallin family protein {ECO:0000313|EMBL:EMT51902.1}; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
alanine dehydrogenase
S28_scaffold_194_curated_3
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(1803..2774)
DNA (972bp) protein (324aa)
Pyridoxal-5'-phosphate-dependent protein, beta subunit n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TKP9_ALKMQ rbh
pyridoxal-5'-phosphate-dependent protein subunit beta rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_194_curated_4
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

2910..3953
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034A792A
oxidoreductase
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_194_curated_5
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(4011..5630)
DNA (1620bp) protein (540aa)
Putative periplasmic oligopeptide-binding protein n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2L445_9FIRM rbh
family 5 extracellular solute-binding protein rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_194_curated_6
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(5658..6608)
DNA (951bp) protein (317aa)
Oligopeptide/dipeptide ABC transporter n=2 Tax=Clostridium symbiosum RepID=E7GLN2_CLOSY rbh
appF; oligopeptide transport ATP-binding protein AppF rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_194_curated_7
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(6601..7620)
DNA (1020bp) protein (340aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=1 Tax=Stomatobaculum longum RepID=H1HWH0_9FIRM rbh
peptide ABC transporter, ATP-binding protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_194_curated_8
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(7633..8802)
DNA (1170bp) protein (390aa)
Putative oligopeptide ABC transporter, permease protein OppC n=1 Tax=Oribacterium sp. oral taxon 078 str. F0262 RepID=D4CLR9_9FIRM rbh
ABC transporter permease
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_194_curated_9
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(8817..9734)
DNA (918bp) protein (306aa)
Putative oligopeptide transport system permease protein OppB n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2LAT7_9FIRM rbh
binding-protein-dependent transport system inner membrane protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_194_curated_10
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

9908..10678
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA255-J07 RepID=UPI00037A75DE
Hypothetical protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_194_curated_11
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(10742..12550)
DNA (1809bp) protein (603aa)
hypothetical protein n=1 Tax=Synergistetes bacterium JGI 0000079-D21 RepID=UPI0003B6529D rbh
EDD domain-containing protein, DegV family rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_194_curated_12
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12700..13452
DNA (753bp) protein (251aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HRY4_CYAP4
hypothetical protein
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; Flags: Precursor;; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
S28_scaffold_194_curated_13
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

13672..15345
DNA (1674bp) protein (558aa)
Asparagine synthetase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QXL8_SPHPG rbh
asparagine synthase rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
S28_scaffold_194_curated_14
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(15342..16397)
DNA (1056bp) protein (352aa)
Metallophosphoesterase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EZ93_SPICH rbh
metallophosphoesterase rbh
Metallophosphoesterase {ECO:0000313|EMBL:AEJ19685.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
S28_scaffold_194_curated_15
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(16407..16907)
DNA (501bp) protein (167aa)
Acetolactate synthase, small subunit n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EZR4_SPICH
acetolactate synthase, small subunit
Acetolactate synthase, small subunit {ECO:0000313|EMBL:AEJ20788.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
S28_scaffold_194_curated_16
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(16907..18616)
DNA (1710bp) protein (570aa)
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6) rbh
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; Flags: Precursor;; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
Acetolactate synthase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EZR3_SPICH rbh
S28_scaffold_194_curated_17
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(18613..19239)
DNA (627bp) protein (209aa)
3-isopropylmalate dehydratase, small subunit id=2941103 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
3-isopropylmalate dehydratase, small subunit
Tax=GWC1_Treponema_61_84_curated
S28_scaffold_194_curated_18
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(19236..20636)
DNA (1401bp) protein (467aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EZR1_SPICH rbh
3-isopropylmalate dehydratase large subunit rbh
S28_scaffold_194_curated_19
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(20716..22581)
DNA (1866bp) protein (622aa)
dihydroxy-acid dehydratase (EC:4.2.1.9) rbh
Dihydroxy-acid dehydratase n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EZR0_SPICH rbh
Tax=GWC1_Treponema_61_84_curated
S28_scaffold_194_curated_20
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

22914..25535
DNA (2622bp) protein (874aa)
id=2952365 bin=GWF1_Spirochaetes_60_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes rbh
hypothetical protein
Tax=GWB1_Spirochaetes_60_80_curated
S28_scaffold_194_curated_21
GWB1_Spirochaetes_60_80_curated, Spirochaetes, Bacteria

Not on your lists

25525..26826
DNA (1302bp) protein (434aa)
Uncharacterized protein id=3223390 bin=GWB1_Spirochaetales_60_80 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetales_60_80 organism_group=Spirochaetes rbh
hypothetical protein rbh
Tax=GWB1_Spirochaetes_60_80_curated
S28_scaffold_194_curated_22
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(26931..30701)
DNA (3771bp) protein (1257aa)
glutamate synthase n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036522BA rbh
glutamate synthase large subunit rbh
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
Displaying 22 items

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