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S8_scaffold_55_curated

Search features with annotation key words

Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S8_scaffold_55_curated_1
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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3..179
DNA (177bp) protein (59aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=uncultured bacterium RepID=K1YIY2_9BACT
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_55_curated_2

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176..1054
DNA (879bp) protein (293aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=uncultured bacterium RepID=K1Y608_9BACT rbh
glucose-1-phosphate thymidylyltransferase rbh
S8_scaffold_55_curated_3
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1056..1604
DNA (549bp) protein (183aa)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AGY53251.1}; EC=5.1.3.13 {ECO:0000313|EMBL:AGY53251.1};; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Bacteroidales bacterium CF RepID=U5Q422_9BACT
hypothetical protein
S8_scaffold_55_curated_4
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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comp(1636..2610)
DNA (975bp) protein (325aa)
Uncharacterized protein id=3650301 bin=GWF2_Bacteroidetes_33_16 species=Bacteroides nordii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
putative glycosyltransferase
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_55_curated_5
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

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comp(2612..3568)
DNA (957bp) protein (319aa)
Uncharacterized protein id=1902887 bin=GWE2_Bacteroidetes_40_15 species=Bacteroides finegoldii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
wcfK; putative epimerase/dehydratase
Tax=BJP_08E140C01_Bacteroidetes_41_49
S8_scaffold_55_curated_6
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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comp(3575..4417)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y5B7_9BACT rbh
polysaccharide deacetylase
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_55_curated_7
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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comp(4423..5484)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y4V6_9BACT rbh
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_55_curated_8

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comp(5486..6166)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YII1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD32398.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
3-oxoacyl-(acyl-carrier-protein) reductase
S8_scaffold_55_curated_9
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(6170..7159)
DNA (990bp) protein (330aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41) rbh
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=uncultured bacterium RepID=K1Z3F4_9BACT rbh
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_55_curated_10
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7169..8257)
DNA (1089bp) protein (363aa)
Glycosyltransferase, GT4 family {ECO:0000313|EMBL:KGL60303.1}; EC=2.4.1.- {ECO:0000313|EMBL:KGL60303.1};; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_33_49.;"
A-glycosyltransferase-related protein, glycosyltransferase family 4 protein id=4156468 bin=GWF2_Bacteroidetes_33_38 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
rgpA; a-glycosyltransferase rbh
S8_scaffold_55_curated_11
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(8258..9157)
DNA (900bp) protein (300aa)
dtdp-4-dehydrorhamnose reductase id=3343936 bin=GWF2_Bacteroidetes_42_66 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73 rbh
dtdp-4-dehydrorhamnose reductase rbh
Tax=GWE2_Bacteroidetes_42_39_curated
S8_scaffold_55_curated_12
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(9154..10395)
DNA (1242bp) protein (414aa)
Glycosyltransferase family 4 id=3080983 bin=GWA2_Bacteroidetes_42_15 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes rbh
glycosyl transferase family protein rbh
Tax=GWE2_Bacteroidetes_42_39_curated
S8_scaffold_55_curated_13
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10723..11949)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BCK8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95829.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
S8_scaffold_55_curated_14
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11956..12945)
DNA (990bp) protein (330aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7S148_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFF02523.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
glycosyl transferase
S8_scaffold_55_curated_15
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(12951..14123)
DNA (1173bp) protein (391aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3EM03_CHLPB rbh
DegT/DnrJ/EryC1/StrS aminotransferase rbh
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:ACE04844.1}; TaxID=331678 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium phaeobacteroides (strain BS1).;"
S8_scaffold_55_curated_16
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(14129..15064)
DNA (936bp) protein (312aa)
fcl; GDP-L-fucose synthase (EC:1.1.1.271)
hypothetical protein FUAG_01566 id=2849326 bin=GWB1_CP_36_13 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
Tax=GWB1_Spirochaetes_36_13_curated
S8_scaffold_55_curated_17
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(15067..16113)
DNA (1047bp) protein (349aa)
GDP-mannose 4,6-dehydratase id=3762945 bin=GWF2_Bacteroidetes_35_48 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 rbh
GDP-mannose 4,6-dehydratase rbh
Tax=GWF2_Bacteroidetes_35_48_curated
S8_scaffold_55_curated_18
Nautilia profundicola, Nautilia, Nautiliales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(16118..17245)
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) RepID=B9L6Q0_NAUPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM92277.1}; TaxID=598659 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Nautiliales; Nautiliaceae; Nautilia.;" source="Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH).;"
S8_scaffold_55_curated_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17257..18264)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HNA9_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY93166.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
S8_scaffold_55_curated_20
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(18261..19688)
DNA (1428bp) protein (476aa)
Polysaccharide biosynthesis protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NHE4_ROSCS
polysaccharide biosynthesis protein
Tax=GWA2_Bacteroidetes_31_9_curated
S8_scaffold_55_curated_21
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(19995..20636)
DNA (642bp) protein (214aa)
Conserved domain protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PUR1_9BACE
Conserved domain protein {ECO:0000313|EMBL:EGF56004.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
S8_scaffold_55_curated_22
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(20615..21202)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PUR2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF56005.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
S8_scaffold_55_curated_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21202..22263)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9JVZ2_BACFG rbh
NeuB family protein {ECO:0000313|EMBL:EXZ79295.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
putative N-acetylneuraminate synthase rbh
S8_scaffold_55_curated_24
Winogradskyella sp. PG-2, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(22291..23598)
DNA (1308bp) protein (436aa)
Putative bifunctionnal protein : Glutamate-1-semialdehyde 2,1-aminomutase, Acylneuraminate cytidylyltransferase id=4226102 bin=GWA2_Flavobacterium_35_26 species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds rbh
glutamate-1-semialdehyde aminotransferase
Glutamate-1-semialdehyde aminotransferase {ECO:0000313|EMBL:BAO75057.1}; TaxID=754409 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella sp. PG-2.;"
S8_scaffold_55_curated_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23606..24364)
DNA (759bp) protein (253aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I9RJC3_BACFG
Cytidylyltransferase family protein {ECO:0000313|EMBL:EXY76281.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
putative LPS biosynthesis protein
S8_scaffold_55_curated_26
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(24372..25391)
DNA (1020bp) protein (340aa)
UDP-N-acetylglucosamine 4,6-dehydratase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JQT3_9BACT rbh
UDP-N-acetylglucosamine 4,6-dehydratase {ECO:0000313|EMBL:KIX22388.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
UDP-N-acetylglucosamine 4,6-dehydratase
S8_scaffold_55_curated_27
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(25412..26719)
DNA (1308bp) protein (436aa)
UDP-N-acetyl-D-glucosamine dehydrogenase
UDP-glucose/GDP-mannose dehydrogenase id=2052947 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes rbh
Tax=GWF2_Bacteroidetes_41_31_curated
S8_scaffold_55_curated_28
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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comp(26780..27907)
DNA (1128bp) protein (376aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=uncultured bacterium RepID=K1YIK7_9BACT rbh
lipopolysaccharide biosynthesis protein rbh
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_55_curated_29
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(27907..30288)
DNA (2382bp) protein (794aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z3H8_9BACT rbh
polysaccharide export protein rbh
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_55_curated_30
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(30316..32289)
DNA (1974bp) protein (658aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XPK8_9BACT rbh
polysaccharide biosynthesis protein CapD rbh
Tax=BJP_IG2069_Bacteroidetes_43_11
Displaying items 1-30 of 136 in total

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