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S13_scaffold_490_curated

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S13_scaffold_490_curated_1
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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1..1176
DNA (1176bp) protein (392aa)
Glucosidase (Fragment) id=2189117 bin=GWE2_Firmicute_51_13 species=uncultured organism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
6-phospho-beta-glucosidase rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_490_curated_2
unknown

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1247..1402
DNA (156bp) protein (52aa)

This feature has no annotations

S13_scaffold_490_curated_3
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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1491..1997
DNA (507bp) protein (169aa)
CarD-like protein n=3 Tax=Turicibacter RepID=F0HI42_9FIRM
transcriptional regulator
Transcriptional regulator, CarD family {ECO:0000313|EMBL:ABI69172.1}; TaxID=335541 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen).;"
S13_scaffold_490_curated_4
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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2076..3020
DNA (945bp) protein (315aa)
Putative oxidoreductase, Gfo/Idh/MocA family id=2077722 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
oxidoreductase
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_490_curated_5
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3017..3280
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DDE0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM57596.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
S13_scaffold_490_curated_6

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3293..3586
DNA (294bp) protein (98aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) RepID=A2SSJ3_METLZ
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:AHF26423.1}; TaxID=1393431 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig1468_n_1482_cl.;"
hypothetical protein
S13_scaffold_490_curated_7
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3848..4690
DNA (843bp) protein (281aa)
Tungstate ABC transporter, tungstate-binding protein n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HSE1_9FIRM
Tungstate ABC transporter, tungstate-binding protein {ECO:0000313|EMBL:EEU13491.1}; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus vaginalis ATCC 51170.;"
tungstate ABC transporter permease
S13_scaffold_490_curated_8
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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4788..5246
DNA (459bp) protein (153aa)
Transcriptional regulator, MarR family id=2808132 bin=GWF2_Firmicute_51_9 species=Peptostreptococcus stomatis genus=Peptostreptococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
transcriptional regulator
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_490_curated_9
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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5243..6634
DNA (1392bp) protein (464aa)
Putative efflux protein, MATE family id=2808128 bin=GWF2_Firmicute_51_9 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
putative efflux protein, MATE family rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_490_curated_10
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7415..8755
DNA (1341bp) protein (447aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein id=4519507 bin=GWF2_Firmicute_51_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
Sensory box/GGDEF domain protein {ECO:0000313|EMBL:EOC99738.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
diguanylate cyclase with PAS/PAC sensor
S13_scaffold_490_curated_11
candidate division TM7 genomosp. GTL1, Candidatus Saccharibacteria, Bacteria

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8788..9432
DNA (645bp) protein (215aa)
Thymidylate synthase-like protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRW4_9BACT
Thymidylate synthase-like protein {ECO:0000313|EMBL:EDK72809.1}; TaxID=443342 species="Bacteria; Candidatus Saccharibacteria.;" source="candidate division TM7 genomosp. GTL1.;"
S13_scaffold_490_curated_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9489..10346
DNA (858bp) protein (286aa)
EDD, DegV family domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NGB1_CLODI
EDD, DegV family domain protein {ECO:0000313|EMBL:EQJ54475.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
DegV family protein
S13_scaffold_490_curated_13
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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10333..11037
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002E59051
UBA/THIF-type NAD/FAD binding protein
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_490_curated_14
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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11030..11380
DNA (351bp) protein (117aa)
Putative uncharacterized protein id=3750619 bin=GWF2_Firmicute_51_9 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
hypothetical protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
S13_scaffold_490_curated_15
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11390..12451
DNA (1062bp) protein (354aa)
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
L-threonine 3-dehydrogenase n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L9Q7_9BACI rbh
L-threonine 3-dehydrogenase rbh
S13_scaffold_490_curated_16
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

13216..13629
DNA (414bp) protein (138aa)
pyridoxal phosphate-dependent acyltransferase (EC:2.3.1.29)
8-amino-7-oxononanoate synthase id=3619191 bin=GWF2_Firmicute_51_9 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_490_curated_17
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13721..14278
DNA (558bp) protein (186aa)
Nitroreductase n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D4F5_DESAJ
Nitroreductase family protein {ECO:0000313|EMBL:KAJ52504.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
nitroreductase
S13_scaffold_490_curated_18
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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14308..15723
DNA (1416bp) protein (472aa)
6-phosphogluconate dehydrogenase (EC:1.1.1.44) rbh
6-phosphogluconate dehydrogenase, decarboxylating id=3408151 bin=GWF2_Firmicute_51_9 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_490_curated_19
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

15695..17140
DNA (1446bp) protein (482aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49) rbh
Glucose-6-phosphate 1-dehydrogenase id=2077478 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_490_curated_20
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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17150..18028
DNA (879bp) protein (293aa)
Patatin family phospholipase id=2077482 bin=GWE2_Firmicute_51_13 species=Erysipelothrix rhusiopathiae genus=Erysipelothrix taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
patatin-like phospholipase
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_490_curated_21
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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comp(17984..18985)
DNA (1002bp) protein (334aa)
Putative uncharacterized protein id=2077487 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
mutY; A/G-specific adenine glycosylase
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_490_curated_22
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

19216..21066
DNA (1851bp) protein (617aa)
Putative uncharacterized protein id=3408130 bin=GWF2_Firmicute_51_9 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
typA.1; GTP-binding protein TypA rbh
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_490_curated_23
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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21068..22204
DNA (1137bp) protein (379aa)
Queuine tRNA-ribosyltransferase id=3408128 bin=GWF2_Firmicute_51_9 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute rbh
queuine tRNA-ribosyltransferase
Tax=GWF2_Firmicutes_51_9_curated
S13_scaffold_490_curated_24
Acholeplasma palmae, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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22204..22347
DNA (144bp) protein (48aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=38986 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma palmae.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Acholeplasma palmae (strain ATCC 49389 / J233) RepID=U4KKF2_ACHPJ
queA; tRNA ribosyltransferase-isomerase (Queuosine biosynthesis protein QueA)
Displaying 24 items

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