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14_0903_02_30cm_scaffold_63

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Displaying items 1-30 of 86 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_02_30cm_scaffold_63_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3..206
DNA (204bp) protein (68aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_63_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(203..751)
DNA (549bp) protein (183aa)
Thioredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADP5_GEMAT
thioredoxin
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_63_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(745..1422)
DNA (678bp) protein (226aa)
Thiol--disulfide interchange protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADP4_GEMAT
thiol--disulfide interchange protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_63_4
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

1469..2137
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FI45_9BACT
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
14_0903_02_30cm_scaffold_63_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2215..2577
DNA (363bp) protein (121aa)
CMP/dCMP deaminase, zinc-binding protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G933_GEOUR
zinc-binding CMP/dCMP deaminase
CMP/dCMP deaminase, zinc-binding protein {ECO:0000313|EMBL:ABQ28301.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
14_0903_02_30cm_scaffold_63_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2574..3398)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B694D6
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_02_30cm_scaffold_63_7

Not on your lists

comp(3476..4003)
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIS0_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY89242.1}; TaxID=333371 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC-L1N9.;"
hypothetical protein
14_0903_02_30cm_scaffold_63_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4033..4401
DNA (369bp) protein (123aa)
RNA-binding S4 domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F693_CONWI
RNA-binding S4 domain protein {ECO:0000313|EMBL:AHG91535.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA-binding S4 domain-containing protein
14_0903_02_30cm_scaffold_63_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4387..5460)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAU0_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG92024.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
14_0903_02_30cm_scaffold_63_10
Prevotella sp. oral taxon 472, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5529..5969
DNA (441bp) protein (147aa)
Nodulation efficiency protein D n=2 Tax=Prevotella RepID=C9Q1H7_9BACT
Nodulation efficiency protein D {ECO:0000313|EMBL:EEX51486.1}; TaxID=619693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. oral taxon 472 str. F0295.;"
membrane protein
14_0903_02_30cm_scaffold_63_11
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5973..6974
DNA (1002bp) protein (334aa)
Band 7 protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XTR7_9BACT
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:KGN83610.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH860.;"
hypothetical protein
14_0903_02_30cm_scaffold_63_12
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

6971..8113
DNA (1143bp) protein (381aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXQ0_9BACT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
14_0903_02_30cm_scaffold_63_13
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8117..15508)
DNA (7392bp) protein (2464aa)
Cell wall surface anchor family protein n=1 Tax=Streptococcus sanguinis SK115 RepID=F0I8I2_STRSA
Uncharacterized protein {ECO:0000313|EMBL:KGH26086.1}; Flags: Fragment;; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
Ig domain-containing protein
14_0903_02_30cm_scaffold_63_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15533..16747
DNA (1215bp) protein (405aa)
aminotransferase (EC:2.6.1.-) id=24561144 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
aminotransferase (EC:2.6.1.-)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0903_02_30cm_scaffold_63_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16744..18621)
DNA (1878bp) protein (626aa)
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AD13_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_63_16
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

18697..20925
DNA (2229bp) protein (743aa)
Putative oligopeptide transporter, OPT family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAK9_SINAD
oligopeptide transporter
Tax=RBG_16_Zixibacteria_50_21_curated
14_0903_02_30cm_scaffold_63_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20964..22034
DNA (1071bp) protein (357aa)
Peptidase M42 family protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFY1_ROSCS
peptidase M42 family protein
Peptidase M42 family protein {ECO:0000313|EMBL:AHG89987.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_0903_02_30cm_scaffold_63_18
Ficedula albicollis, Ficedula, Passeriformes, Aves, Chordata, Metazoa

Not on your lists

comp(22089..22808)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Ficedula albicollis RepID=U3KCU1_FICAL
RNA polymerase sigma factor
Uncharacterized protein {ECO:0000313|Ensembl:ENSFALP00000012845}; TaxID=59894 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.;" source="Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis).;"
14_0903_02_30cm_scaffold_63_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23028..24548)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S1_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG89986.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
14_0903_02_30cm_scaffold_63_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24578..25819
DNA (1242bp) protein (414aa)
Peptidase M28 {ECO:0000313|EMBL:AHG89985.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M28 id=12555661 bin=CNBR_ACIDO species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidase M28
14_0903_02_30cm_scaffold_63_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

25816..26280
DNA (465bp) protein (155aa)
Putative GAF sensor protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HH02_ANADF
putative GAF sensor protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_02_30cm_scaffold_63_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

26280..27092
DNA (813bp) protein (271aa)
Putative hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S0_GEMAT
Putative hydrolase {ECO:0000313|EMBL:AHG89982.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative hydrolase
14_0903_02_30cm_scaffold_63_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

27137..27751
DNA (615bp) protein (205aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_63_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

27748..28410
DNA (663bp) protein (221aa)
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III (EC:3.2.2.- 4.2.99.18)
Endonuclease III n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASN5_RUBXD
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_63_25
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

28438..29592
DNA (1155bp) protein (385aa)
amidohydrolase (EC:3.5.1.14)
Amidohydrolase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CB03_SPHTD id=5225688 bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
14_0903_02_30cm_scaffold_63_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

29585..31567
DNA (1983bp) protein (661aa)
hypothetical protein; K06888 id=14630958 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_02_30cm_scaffold_63_27
Methanobrevibacter sp. AbM4, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

31602..32051
DNA (450bp) protein (150aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SMZ4_9EURY
peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:AGN17529.1}; TaxID=224719 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter sp. AbM4.;"
14_0903_02_30cm_scaffold_63_28
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

32063..33175
DNA (1113bp) protein (371aa)
Putative uncharacterized protein n=1 Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CMZ2_ROBBH
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_02_30cm_scaffold_63_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

33175..33630
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z4_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_02_30cm_scaffold_63_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

33677..35314
DNA (1638bp) protein (546aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase family protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60BJ5_METCA
dolichyl-phosphate-mannose-protein mannosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying items 1-30 of 86 in total

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