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14_0903_12_20cm_scaffold_83

Search features with annotation key words

Displaying items 1-30 of 128 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0903_12_20cm_scaffold_83_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..768)
DNA (768bp) protein (256aa)
gltB; glutamate synthase [NADPH] large chain (EC:1.4.1.13)
Glutamate synthase [NADPH] large chain {ECO:0000313|EMBL:BAH40123.1}; EC=1.4.1.13 {ECO:0000313|EMBL:BAH40123.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Glutamate synthase [NADPH] large chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC96_GEMAT
14_0903_12_20cm_scaffold_83_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1018..1542)
DNA (525bp) protein (175aa)
PEP phosphonomutase-like protein id=14626847 bin=bin7_NC10_sister species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
PEP phosphonomutase-like protein
Tax=CSP1_6_Rokubacteria
14_0903_12_20cm_scaffold_83_3
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1539..1841)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H8A2_STRPR
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
14_0903_12_20cm_scaffold_83_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2042..2824
DNA (783bp) protein (261aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_0903_12_20cm_scaffold_83_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2898..5096
DNA (2199bp) protein (733aa)
dipeptidyl-peptidase IV (EC:3.4.14.5) rbh
Dipeptidyl-peptidase IV {ECO:0000313|EMBL:AEN73784.1}; EC=3.4.14.5 {ECO:0000313|EMBL:AEN73784.1};; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
Dipeptidyl-peptidase IV n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI26_RHOMR rbh
14_0903_12_20cm_scaffold_83_6
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5075..6352
DNA (1278bp) protein (426aa)
Major facilitator superfamily MFS_1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J9R1_ANAD2
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACL67449.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
14_0903_12_20cm_scaffold_83_7
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6336..7103)
DNA (768bp) protein (256aa)
TPR repeat-containing protein n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CX15_HALOH
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ACL69834.1}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562).;"
14_0903_12_20cm_scaffold_83_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7249..8631)
DNA (1383bp) protein (461aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=2085290 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fis family two component sigma-54 specific transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0903_12_20cm_scaffold_83_9
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8628..10307)
DNA (1680bp) protein (560aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IEU8_ANADE
periplasmic sensor signal transduction histidine kinase
14_0903_12_20cm_scaffold_83_10
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10304..11608)
DNA (1305bp) protein (435aa)
ABC transporter substrate-binding protein n=1 Tax=Streptomyces violaceoniger RepID=UPI0003C77354
Uncharacterized protein {ECO:0000313|EMBL:EZQ65391.1}; TaxID=1445865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens BIDMC 81.;"
ABC transporter periplasmic protein
14_0903_12_20cm_scaffold_83_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11675..12067)
DNA (393bp) protein (131aa)
YraH id=3964376 bin=GWC2_Ignavibacteria_56_12 species=Bacillus sp. NRRL B-14911 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
methylmalonyl-CoA epimerase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_0903_12_20cm_scaffold_83_12
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12108..13166)
DNA (1059bp) protein (353aa)
Agmatine deiminase id=3982000 bin=GWC2_Syntrophobacterales_56_13 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
aguA; agmatine deiminase
Tax=RBG_16_Deltaproteobacteria_58_17_curated
14_0903_12_20cm_scaffold_83_13
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13202..14113)
DNA (912bp) protein (304aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase id=2854538 bin=GWC2_Deltaproteobacteria_66_88 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
hydrolase
Tax=CG_Delta_02
14_0903_12_20cm_scaffold_83_14
unknown

Not on your lists

comp(14171..14950)
DNA (780bp) protein (260aa)

This feature has no annotations

14_0903_12_20cm_scaffold_83_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15011..15694)
DNA (684bp) protein (228aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B6_GEMAT
Response regulator receiver {ECO:0000313|EMBL:AHG87878.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
OmpR family two-component response regulator
14_0903_12_20cm_scaffold_83_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15691..17373)
DNA (1683bp) protein (561aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8B7_GEMAT
two-component histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_0903_12_20cm_scaffold_83_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

17646..18119
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIA5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_0903_12_20cm_scaffold_83_18
unknown

Not on your lists

18116..18640
DNA (525bp) protein (175aa)

This feature has no annotations

14_0903_12_20cm_scaffold_83_19
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(18648..20093)
DNA (1446bp) protein (482aa)
mmsA; methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKD5_SORC5
Tax=RBG_16_Acidobacteria_68_9_curated
14_0903_12_20cm_scaffold_83_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20200..21720)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NZT3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:AHG91329.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
14_0903_12_20cm_scaffold_83_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(21717..22880)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003619134
Uncharacterized protein {ECO:0000313|EMBL:EDY16288.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
14_0903_12_20cm_scaffold_83_22
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(22883..24295)
DNA (1413bp) protein (471aa)
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein id=24429358 bin=RBG_19FT_COMBO_GAL15_69_19 species=Amycolatopsis sp. ATCC 39116 genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate rbh
family 1 extracellular solute-binding protein
Tax=RBG_16_Armatimonadetes_67_12_curated
14_0903_12_20cm_scaffold_83_23
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(24410..25855)
DNA (1446bp) protein (482aa)
Short chain fatty acid transporter n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPG7_KORVE
short chain fatty acid transporter
Short chain fatty acid transporter {ECO:0000313|EMBL:ABF41233.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
14_0903_12_20cm_scaffold_83_24
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(25869..27800)
DNA (1932bp) protein (644aa)
AMP-dependent synthetase and ligase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7F2_SPHTD
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACZ39798.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
14_0903_12_20cm_scaffold_83_25
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27857..29077)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU98_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAN45139.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
14_0903_12_20cm_scaffold_83_26
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

comp(29153..29989)
DNA (837bp) protein (279aa)
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein id=24429354 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ycjP; ABC transporter permease
Tax=RBG_16_Armatimonadetes_67_12_curated
14_0903_12_20cm_scaffold_83_27
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(29986..30885)
DNA (900bp) protein (300aa)
ABC transporter permease; K02025 multiple sugar transport system permease protein id=24429355 bin=RBG_19FT_COMBO_GAL15_69_19 species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ABC transporter permease
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
14_0903_12_20cm_scaffold_83_28
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(30882..31880)
DNA (999bp) protein (333aa)
sugar ABC transporter ATP binding protein; putative glycerol 3-phosphate transport protein, ugpC-like protein (EC:3.6.3.-) id=14631356 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
ugpC1; sn-glycerol-3-phosphate ABC transporter ATP-binding protein (EC:3.6.3.20)
Tax=CSP1_3_Armatimonadetes
14_0903_12_20cm_scaffold_83_29
unknown

Not on your lists

comp(31946..32170)
DNA (225bp) protein (75aa)

This feature has no annotations

14_0903_12_20cm_scaffold_83_30
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(32174..32518)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAF0_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ40793.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Displaying items 1-30 of 128 in total

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