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14_1009_12_30cm_scaffold_2973

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_12_30cm_scaffold_2973_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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2..553
DNA (552bp) protein (184aa)
Amino acid/polyamine/organocation transporter, APC superfamily id=3948639 bin=GWF2_Melioribacter_38_21 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
amino acid transporter
Tax=RBG_16_Actinobacteria_67_10_curated
14_1009_12_30cm_scaffold_2973_2
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(699..2294)
DNA (1596bp) protein (532aa)
amine oxidase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B20 rbh
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABS27675.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
14_1009_12_30cm_scaffold_2973_3
unknown

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2346..2753
DNA (408bp) protein (136aa)

This feature has no annotations

14_1009_12_30cm_scaffold_2973_4
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2771..3904)
DNA (1134bp) protein (378aa)
PREDICTED: zonadhesin-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBBE50
Uncharacterized protein {ECO:0000313|EMBL:EYR69258.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
Conserved protein of unknown function, PE-PGRS family protein PE_PGRS54 (part2)
14_1009_12_30cm_scaffold_2973_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4024..4683
DNA (660bp) protein (220aa)
Aminotransferase, class IV n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AY00_RUBXD id=5223707 bin=16ft_combo_ws3_JS1 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
class IV aminotransferase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_12_30cm_scaffold_2973_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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4707..5651
DNA (945bp) protein (315aa)
Putative IPT/TIG domain protein n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WWF4_9ACTO
ABC transporter permease
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_12_30cm_scaffold_2973_7
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(5665..6078)
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y5L2_9RHIZ
Tax=RBG_16_Planctomycetes_64_12_curated
14_1009_12_30cm_scaffold_2973_trna_1
unknown

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6215..6288
DNA (74bp)
transferRNA His
14_1009_12_30cm_scaffold_2973_8
unknown

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6727..7233
DNA (507bp) protein (169aa)

This feature has no annotations

14_1009_12_30cm_scaffold_2973_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(7841..8479)
DNA (639bp) protein (213aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter sp. (strain M18) RepID=E8WPG5_GEOS8
LuxR family two component transcriptional regulator
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_12_30cm_scaffold_2973_10
R_NC10_66_22, NC10, Bacteria

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comp(8481..10247)
DNA (1767bp) protein (589aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WPG6_GEOS8
multi-sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
14_1009_12_30cm_scaffold_2973_11
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10390..10686
DNA (297bp) protein (99aa)
Tax=BJP_IG2069_Syntrophobacterales_47_18
14_1009_12_30cm_scaffold_2973_12
unknown

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11105..11362
DNA (258bp) protein (86aa)

This feature has no annotations

14_1009_12_30cm_scaffold_2973_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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11375..11866
DNA (492bp) protein (164aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88819.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_12_30cm_scaffold_2973_14
RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated, Moranbacteria, Parcubacteria, Bacteria

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11863..13086
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PND9_CHIPD id=5224609 bin=16ft_combo_ws3_JS1 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated
Displaying 15 items

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