ggKbase home page

14_1009_12_30cm_scaffold_70

Search features with annotation key words

Displaying items 1-30 of 58 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_12_30cm_scaffold_70_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..372)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39030.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_1009_12_30cm_scaffold_70_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(376..1098)
DNA (723bp) protein (241aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
Short-chain dehydrogenase/reductase n=1 Tax=uncultured gamma proteobacterium RepID=H5SE57_9GAMM
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_12_30cm_scaffold_70_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1104..1382)
DNA (279bp) protein (93aa)
Putative bacterioferritin comigratory protein n=1 Tax=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) RepID=C0ZAZ9_BREBN
bacterioferritin comigratory protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_12_30cm_scaffold_70_4
unknown

Not on your lists

comp(1413..1556)
DNA (144bp) protein (48aa)

This feature has no annotations

14_1009_12_30cm_scaffold_70_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1553..2359)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K7_GEMAT
PHP domain protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_12_30cm_scaffold_70_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2409..2678)
DNA (270bp) protein (90aa)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_12_30cm_scaffold_70_7
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(2679..2993)
DNA (315bp) protein (105aa)
Tax=RBG_16_Actinobacteria_67_10_curated
14_1009_12_30cm_scaffold_70_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2996..4318)
DNA (1323bp) protein (441aa)
Dihydrolipoamide acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A958_GEMAT
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_12_30cm_scaffold_70_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4407..5387)
DNA (981bp) protein (327aa)
Branched-chain alpha-keto acid dehydrogenase E1 component n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH09_CHLTF
Transketolase central region
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_12_30cm_scaffold_70_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5388..6443)
DNA (1056bp) protein (352aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD8_CHLTF
dehydrogenase E1 component
Dehydrogenase E1 component {ECO:0000313|EMBL:AHG91135.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_12_30cm_scaffold_70_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6510..6725
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Sutterella sp. CAG:351 RepID=R7ILK6_9BURK
heavy metal translocating P-type ATPase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_12_30cm_scaffold_70_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6722..7012)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A960_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_12_30cm_scaffold_70_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7026..9578)
DNA (2553bp) protein (851aa)
Copper-transporting P-type ATPase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YU20_MELRP
heavy metal translocating P-type ATPase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_12_30cm_scaffold_70_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(9571..9996)
DNA (426bp) protein (142aa)
copper-binding protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B761CF
Cupredoxin-like domain {ECO:0000313|EMBL:CDM64284.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
copper-exporting ATPase
14_1009_12_30cm_scaffold_70_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9993..11318)
DNA (1326bp) protein (442aa)
Myo-inositol-1-phosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A962_GEMAT
Myo-inositol-1-phosphate synthase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_12_30cm_scaffold_70_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11321..12019)
DNA (699bp) protein (233aa)
Putative phosphatidylinositol synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A963_GEMAT
putative phosphatidylinositol synthase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_12_30cm_scaffold_70_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12069..13250)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A964_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_12_30cm_scaffold_70_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13284..15038
DNA (1755bp) protein (585aa)
beta-N-acetylhexosaminidase., beta-lactamase (EC:3.5.2.6 3.2.1.52)
Beta-N-acetylhexosaminidase., Beta-lactamase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJI0_RHOMR
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_12_30cm_scaffold_70_19
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

15035..16279
DNA (1245bp) protein (415aa)
Beta-lactamase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A965_GEMAT
beta-lactamase family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
14_1009_12_30cm_scaffold_70_20
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(16462..18240)
DNA (1779bp) protein (593aa)
Na+/solute symporter n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN77_KORVE
Na+/solute symporter
Tax=RBG_16_Ignavibacteria_35_7_curated
14_1009_12_30cm_scaffold_70_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

18360..18719
DNA (360bp) protein (120aa)
Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A966_GEMAT
iron-sulfur cluster assembly accessory protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_12_30cm_scaffold_70_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18854..20266
DNA (1413bp) protein (471aa)
Putative sodium/solute symporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A968_GEMAT
SSS sodium solute transporter superfamily
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_12_30cm_scaffold_70_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20270..21196
DNA (927bp) protein (309aa)
Putative N-acetylglucosamine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A969_GEMAT
ATPase BadF/BadG/BcrA/BcrD type
ATPase BadF/BadG/BcrA/BcrD type {ECO:0000313|EMBL:AHG91146.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_12_30cm_scaffold_70_24
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(21201..22496)
DNA (1296bp) protein (432aa)
Sodium:dicarboxylate symporter family protein id=3114362 bin=GWA2_Ignavibacteria_55_11 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
proton/sodium-glutamate symport protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
14_1009_12_30cm_scaffold_70_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(22493..23995)
DNA (1503bp) protein (501aa)
Putative permease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A971_GEMAT
putative permease
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
14_1009_12_30cm_scaffold_70_26
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24075..26210)
DNA (2136bp) protein (712aa)
K(+)-insensitive pyrophosphate-energized proton pump id=1842624 bin=GWA2_Elusimicrobia_66_18 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Pyrophosphate-energized proton pump
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
14_1009_12_30cm_scaffold_70_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26250..26921)
DNA (672bp) protein (224aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_12_30cm_scaffold_70_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(27101..27517)
DNA (417bp) protein (139aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A973_GEMAT
Biopolymer transport protein ExbD/TolR
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_12_30cm_scaffold_70_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27521..27976)
DNA (456bp) protein (152aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A974_GEMAT
Biopolymer transport protein ExbD/TolR
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_12_30cm_scaffold_70_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(27957..28706)
DNA (750bp) protein (250aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A975_GEMAT
MotA/TolQ/ExbB proton channel
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying items 1-30 of 58 in total

View Taxonomy