ggKbase home page

14_1009_16_30cm_scaffold_2823

Search features with annotation key words

Displaying items 1-30 of 34 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_1009_16_30cm_scaffold_2823_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1..231
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T2_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_2823_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

228..1547
DNA (1320bp) protein (440aa)
GTPase Der n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DER_GEMAT
engA; GTP-binding protein EngA
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_2823_3
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

1544..2158
DNA (615bp) protein (205aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Leptospira vanthielii serovar Holland str. Waz Holland = ATCC 700522 RepID=N1W1F9_9LEPT
membrane protein
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
14_1009_16_30cm_scaffold_2823_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2155..3156
DNA (1002bp) protein (334aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T5_GEMAT
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_2823_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3153..3530
DNA (378bp) protein (126aa)
MerR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T6_GEMAT
regulatory protein MerR
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_2823_6
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3514..4236
DNA (723bp) protein (241aa)
Glycosyltransferase involved in cell wall biogenesis (EC:2.4.-.-)
Glycosyltransferase involved in cell wall biogenesis {ECO:0000313|EMBL:AHJ64334.1}; EC=2.4.-.- {ECO:0000313|EMBL:AHJ64334.1};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
Putative glycosyltransferase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0I1_ANATU id=5224041 bin=16ft_combo_ws3_JS1 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
14_1009_16_30cm_scaffold_2823_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4233..4982
DNA (750bp) protein (250aa)
5'-nucleotidase SurE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SURE_GEMAT
Survival protein SurE-like phosphatase/nucleotidase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_2823_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4964..5632
DNA (669bp) protein (223aa)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T8_GEMAT
Protein-L-isoaspartate O-methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_16_30cm_scaffold_2823_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5625..6266
DNA (642bp) protein (214aa)
DedA family protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AKP6_PELPD
DedA family protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_16_30cm_scaffold_2823_10
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6508..7041
DNA (534bp) protein (178aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
Adenine phosphoribosyltransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QN48_9DELT
apt; adenine phosphoribosyltransferase
14_1009_16_30cm_scaffold_2823_trna_1
unknown

Not on your lists

7065..7138
DNA (74bp)
transferRNA Arg
14_1009_16_30cm_scaffold_2823_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7192..7872
DNA (681bp) protein (227aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IWY3_CYCMS
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
14_1009_16_30cm_scaffold_2823_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7955..8824)
DNA (870bp) protein (290aa)
Diaminopimelate epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DAPF_GEMAT
Diaminopimelate epimerase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_2823_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8776..9498)
DNA (723bp) protein (241aa)
Putative polyprenol-phosphate mannosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U4_GEMAT
putative polyprenol-phosphate mannosyltransferase
Putative polyprenol-phosphate mannosyltransferase {ECO:0000313|EMBL:BAH38654.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
14_1009_16_30cm_scaffold_2823_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9491..11830)
DNA (2340bp) protein (780aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A770_GEMAT
hypothetical membrane protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_16_30cm_scaffold_2823_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11827..12753)
DNA (927bp) protein (309aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U6_GEMAT
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_16_30cm_scaffold_2823_16
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

comp(12750..14201)
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B36A41
hypothetical protein
Tax=BJP_IG2102_BRC1_58_13
14_1009_16_30cm_scaffold_2823_17
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14198..14671)
DNA (474bp) protein (158aa)
Chloramphenicol acetyltransferase {ECO:0000313|EMBL:AKB17607.1}; EC=2.3.1.28 {ECO:0000313|EMBL:AKB17607.1};; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
UPI0003D1A06F related cluster n=1 Tax=unknown RepID=UPI0003D1A06F
galactoside-O-acetyltransferase
14_1009_16_30cm_scaffold_2823_18
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(14668..15714)
DNA (1047bp) protein (349aa)
Methicillin resistance protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLV7_9CHLR
Methicillin resistance protein {ECO:0000313|EMBL:EFH86757.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
14_1009_16_30cm_scaffold_2823_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15683..16867)
DNA (1185bp) protein (395aa)
Glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U7_GEMAT
glycosyl transferase group 1
Glycosyl transferase group 1 {ECO:0000313|EMBL:AHG90785.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
14_1009_16_30cm_scaffold_2823_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(16867..17817)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6JWE3_STRRC
40-residue YVTN family beta-propeller repeat-containing protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
14_1009_16_30cm_scaffold_2823_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17814..18779)
DNA (966bp) protein (322aa)
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U8_GEMAT
glycosyl transferase family 2
Tax=RBG_16_Gemmatimonadetes_66_8_curated
14_1009_16_30cm_scaffold_2823_22
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(18776..20233)
DNA (1458bp) protein (486aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT
RNA polymerase sigma-54 factor, RpoN
Tax=RBG_16_Acidobacteria_68_9_curated
14_1009_16_30cm_scaffold_2823_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20230..21423)
DNA (1194bp) protein (398aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V0_GEMAT
ABC transporter related protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_16_30cm_scaffold_2823_24
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(21420..22751)
DNA (1332bp) protein (444aa)
hypothetical protein
Tax=RBG_16_Acidobacteria_68_9_curated
14_1009_16_30cm_scaffold_2823_25
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(22748..23365)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V2_GEMAT
protein of unknown function DUF1239
Tax=RBG_16_Acidobacteria_68_9_curated
14_1009_16_30cm_scaffold_2823_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23362..24333)
DNA (972bp) protein (324aa)
kdsD; arabinose 5-phosphate isomerase (EC:5.3.1.13)
Arabinose 5-phosphate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V3_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_16_30cm_scaffold_2823_27
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24302..24874)
DNA (573bp) protein (191aa)
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V4_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_16_30cm_scaffold_2823_28
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24877..25695)
DNA (819bp) protein (273aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V5_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
14_1009_16_30cm_scaffold_2823_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(25697..27364)
DNA (1668bp) protein (556aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V6_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying items 1-30 of 34 in total

View Taxonomy