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13_1_40cm_4_scaffold_1129

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1129_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..551)
DNA (549bp) protein (183aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_1129_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(571..1020)
DNA (450bp) protein (150aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SMZ4_9EURY
peptidyl-prolyl cis-trans isomerase
peptidyl-prolyl cis-trans isomerase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_1129_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1034..3019)
DNA (1986bp) protein (662aa)
hypothetical protein; K06888 Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein; K06888 id=14630958 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_40cm_4_scaffold_1129_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(3103..4260)
DNA (1158bp) protein (386aa)
amidohydrolase (EC:3.5.1.14); K01436 amidohydrolase [EC:3.5.1.-] Tax=RBG_16_RIF_WS3X_71_46_curated
amidohydrolase (EC:3.5.1.14)
Amidohydrolase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CB03_SPHTD id=5225688 bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_40cm_4_scaffold_1129_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4263..4943)
DNA (681bp) protein (227aa)
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III; K10773 endonuclease III [EC:4.2.99.18] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III (EC:3.2.2.- 4.2.99.18)
Endonuclease III n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASN5_RUBXD
13_1_40cm_4_scaffold_1129_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4965..5807)
DNA (843bp) protein (281aa)
Putative hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S0_GEMAT
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAH37580.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 /
13_1_40cm_4_scaffold_1129_7
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5829..7604
DNA (1776bp) protein (592aa)
ABC transporter, inner membrane subunit n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IG76_ANADE
ABC transporter inner membrane subunit
ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ABC83585.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaer
13_1_40cm_4_scaffold_1129_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7601..8908
DNA (1308bp) protein (436aa)
ABC transporter related-protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIU4_9BACT
ABC transporter related-protein {ECO:0000313|EMBL:EEF60171.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" sour
taurine ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_1129_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9132..9590)
DNA (459bp) protein (153aa)
Putative GAF sensor protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HH02_ANADF
putative GAF sensor protein; K07170 GAF domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative GAF sensor protein
13_1_40cm_4_scaffold_1129_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

9638..10207
DNA (570bp) protein (190aa)
Signal transduction histidine kinase, LytS n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JVH5_ARTS2
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
signal transduction histidine kinase LytS
13_1_40cm_4_scaffold_1129_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10204..10911
DNA (708bp) protein (236aa)
Cobalt transport protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUT4_RUBXD
cobalt transport protein; K02008 cobalt/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative membrane protein
13_1_40cm_4_scaffold_1129_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10908..11684
DNA (777bp) protein (259aa)
ABC transporter related n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NS79_ROSCS
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC transporter-like protein
13_1_40cm_4_scaffold_1129_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11681..12505
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI000348CBD4
ABC transporter-like protein; K02006 cobalt/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC transporter-like protein
13_1_40cm_4_scaffold_1129_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12960..14249
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89986.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1129_15
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14269..14721)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Saccharibacter floricola RepID=UPI000373368D
DoxX family protein {ECO:0000313|EMBL:GAN55160.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sa
DoxX family protein
13_1_40cm_4_scaffold_1129_16
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(14738..15808)
DNA (1071bp) protein (357aa)
Peptidase M42 family protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFY1_ROSCS
peptidase M42 family protein
Peptidase M42 family protein {ECO:0000313|EMBL:ABU56365.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexu
13_1_40cm_4_scaffold_1129_17
R_KAZAN_48_13, Kazan, Bacteria

Not on your lists

comp(15805..16800)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YHP9_SORCE
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_KAZAN_48_13_curated
hypothetical protein
13_1_40cm_4_scaffold_1129_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(16835..17719)
DNA (885bp) protein (295aa)
Periplasmic binding protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARA8_RUBXD
ABC transporter periplasmic-binding protein; K02016 iron complex transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
periplasmic binding protein
13_1_40cm_4_scaffold_1129_19
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(17809..19035)
DNA (1227bp) protein (409aa)
peptide transporter n=1 Tax=Nevskia ramosa RepID=UPI0003B4C08E
oligopeptide transporter Tax=RBG_16_Zixibacteria_50_21_curated
oligopeptide transporter
Displaying 19 items

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