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13_1_40cm_4_scaffold_148

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_148_1
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(111..986)
DNA (876bp) protein (292aa)
Methyltransferase type 11 n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGV1_SYNFM
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ABK16653.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Synt
13_1_40cm_4_scaffold_148_trna_1
unknown

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comp(1987..2060)
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_148_2
Mucor circinelloides, Mucor, Mucorales, Fungi

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comp(2067..2315)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Mucor circinelloides f. circinelloides (strain 1006PhL) RepID=S2IYU7_MUCC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPB82419.1}; TaxID=1220926 species="Eukaryota; Fungi; Fungi incertae sedis; Early diverging fungal lineages; Mucoromycotina; Mucorales; Mucorineae; Mucoraceae
13_1_40cm_4_scaffold_148_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(2372..3163)
DNA (792bp) protein (264aa)
GTP-binding protein TypA n=4 Tax=Bacteria RepID=C1A9K9_GEMAT
typA; GTP-binding protein TypA; K06207 GTP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
GTP-binding protein TypA
13_1_40cm_4_scaffold_148_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(3147..4166)
DNA (1020bp) protein (340aa)
GTP-binding protein TypA n=4 Tax=Bacteria RepID=C1A9K9_GEMAT
typA; GTP-binding protein TypA; K06207 GTP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
GTP-binding protein TypA
13_1_40cm_4_scaffold_148_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4348..5244)
DNA (897bp) protein (299aa)
Zinc transporter ZitB n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L337_THERP
zinc transporter ZitB; K03295 cation efflux system protein, CDF family Tax=GWC2_Gemmatimonadetes_71_10_curated
zinc transporter ZitB
13_1_40cm_4_scaffold_148_6
Thermoactinomyces sp. Gus2-1, Thermoactinomyces, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5258..6553)
DNA (1296bp) protein (432aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
Histidinol dehydrogenase (EC:1.1.1.23)
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI00037983F4
13_1_40cm_4_scaffold_148_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6606..7946
DNA (1341bp) protein (447aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9X1_GEMAT
hypothetical membrane protein Tax=GWC2_Gemmatimonadetes_71_10_curated
protein of unknown function DUF21
13_1_40cm_4_scaffold_148_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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7943..8902
DNA (960bp) protein (320aa)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YGR7_SORCE
hypothetical protein
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; S
13_1_40cm_4_scaffold_148_9
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

8899..9552
DNA (654bp) protein (218aa)
ATP phosphoribosyltransferase (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17] Tax=CG_Proteo_01
UDP-N-acetylglucosamine 1-carboxyvinyltransferase id=4831881 bin=GWC2_Methylomirabilis_70_24 species=Burkholderia rhizoxinica genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ATP phosphoribosyltransferase catalytic subunit
13_1_40cm_4_scaffold_148_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9549..10298)
DNA (750bp) protein (250aa)
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L0_GEMAT
4-hydroxythreonine-4-phosphate dehydrogenase
13_1_40cm_4_scaffold_148_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(10408..11730)
DNA (1323bp) protein (441aa)
putative peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative peptidyl-prolyl cis-trans isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L1_GEMAT
SurA domain-containing protein
13_1_40cm_4_scaffold_148_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11732..13192)
DNA (1461bp) protein (487aa)
putative peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
Peptidyl-prolyl cis-trans isomerase D n=1 Tax=Azoarcus sp. KH32C RepID=H0PTI5_9RHOO
PpiC-type peptidyl-prolyl cis-trans isomerase
13_1_40cm_4_scaffold_148_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(13202..16507)
DNA (3306bp) protein (1102aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=861299 species="Bacteria; Ge
Transcription-repair-coupling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L3_GEMAT
transcription-repair coupling factor
13_1_40cm_4_scaffold_148_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16507..18222)
DNA (1716bp) protein (572aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L4_GEMAT
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
double-transmembrane region domain protein
13_1_40cm_4_scaffold_148_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18219..19103)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L5_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF58
13_1_40cm_4_scaffold_148_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

19273..20637
DNA (1365bp) protein (455aa)
OmpA/MotB domain protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZAR1_METPB
GF13555 gene product from transcript GF13555-RA Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_148_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

20729..22270
DNA (1542bp) protein (514aa)
peptidase M28 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Aminopeptidase id=3410210 bin=GWA2_Ignavibacteria_55_11 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
putative aminopeptidase
13_1_40cm_4_scaffold_148_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22274..23341)
DNA (1068bp) protein (356aa)
Transcription termination factor Rho n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RHO_GEMAT
transcription termination factor; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transcription termination factor
13_1_40cm_4_scaffold_148_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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23413..24510
DNA (1098bp) protein (366aa)
Elongation factor 4 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L7_GEMAT
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
lepA; GTP-binding protein LepA
Displaying 20 items

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