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13_1_40cm_4_scaffold_1605

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1605_1
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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1..741
DNA (741bp) protein (247aa)
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein n=1 Tax=uncultured Nitrospirae bacterium MY3-5B RepID=D9MP35_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDH47537.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
Ig domain protein group 2 domain protein
13_1_40cm_4_scaffold_1605_2
unknown

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738..1157
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_40cm_4_scaffold_1605_trna_1
unknown

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1218..1290
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_1605_3
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1765..2376
DNA (612bp) protein (204aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037327EC
endopeptidase Clp
13_1_40cm_4_scaffold_1605_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2416..3321
DNA (906bp) protein (302aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=GWC2_Gemmatimonadetes_71_10_curated
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L4P6_9BACT
13_1_40cm_4_scaffold_1605_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3432..3677
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_1605_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3674..3922
DNA (249bp) protein (83aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_1605_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3926..4363
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_1605_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4544..5932
DNA (1389bp) protein (463aa)
transglycosylase, slt family; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative transglycosylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U3_GEMAT
putative transglycosylase
13_1_40cm_4_scaffold_1605_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(5997..6662)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U2_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Lytic transglycosylase catalytic
13_1_40cm_4_scaffold_1605_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(6729..7217)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030DB5CE
molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Molybdenum cofactor biosynthesis C, bacterial-type
13_1_40cm_4_scaffold_1605_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(7214..8266)
DNA (1053bp) protein (351aa)
holB; DNA polymerase III delta' subunit (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA polymerase III delta' subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U0_GEMAT
DNA polymerase III delta' subunit
13_1_40cm_4_scaffold_1605_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(8479..10959)
DNA (2481bp) protein (827aa)
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ABF42015.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABF42015.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
Multi-sensor hybrid histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM85_KORVE
multi-sensor hybrid histidine kinase
13_1_40cm_4_scaffold_1605_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(11015..13828)
DNA (2814bp) protein (938aa)
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ABF42015.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABF42015.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
Multi-sensor hybrid histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM85_KORVE
multi-sensor hybrid histidine kinase
13_1_40cm_4_scaffold_1605_14
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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comp(13833..14261)
DNA (429bp) protein (143aa)
sensory transduction regulatory protein Tax=RBG_13_Nitrospirae_43_8_curated
response regulator receiver protein id=14426277 bin=bin1_lowGC species=Methanobacterium formicicum genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
response regulator receiver protein
13_1_40cm_4_scaffold_1605_trna_2
unknown

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comp(14380..14452)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_1605_15
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

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comp(14522..15271)
DNA (750bp) protein (250aa)
hypothetical protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
hypothetical protein id=7202063 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
membrane protein
13_1_40cm_4_scaffold_1605_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(15406..18213)
DNA (2808bp) protein (936aa)
UvrABC system protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9P0_GEMAT
uvrA; UvrABC system protein A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
excinuclease ABC, A subunit
13_1_40cm_4_scaffold_1605_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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18335..19417
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y147_SORCE
hypothetical protein; K07027 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_1605_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

19506..20252
DNA (747bp) protein (249aa)
FHA domain containing protein n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NB98_9ACTO
FHA domain-containing protein; K02283 pilus assembly protein CpaF Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
FHA domain containing protein
Displaying 20 items

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