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13_1_40cm_4_scaffold_1734

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1734_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3..728
DNA (726bp) protein (242aa)
GTPase Era n=1 Tax=uncultured Gemmatimonadales bacterium HF4000_15H13 RepID=E7C887_9BACT
era; GTP-binding protein Era; K03595 GTP-binding protein Era Tax=RBG_16_Gemmatimonadetes_66_8_curated
GTP-binding protein Era-like-protein
13_1_40cm_4_scaffold_1734_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

725..895
DNA (171bp) protein (57aa)
hypothetical protein; K09791 hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
protein of unknown function DUF343
tetraacyldisaccharide-1-P 4'-kinase; K09791 hypothetical protein id=12497174 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
13_1_40cm_4_scaffold_1734_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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939..1925
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium W5-51b RepID=H9BX65_9BACT
hypothetical protein
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_1734_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1925..2734
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q7_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38617.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_4_scaffold_1734_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2837..3802
DNA (966bp) protein (322aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=uncultured bacterium W5-51b RepID=H9BX64_9BACT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_1734_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4449..4697
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q9_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
MJ0042 family finger-like protein
13_1_40cm_4_scaffold_1734_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4884..5924
DNA (1041bp) protein (347aa)
Protein chain release factor B n=1 Tax=uncultured bacterium W5-51b RepID=H9BX62_9BACT
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=RBG_16_Gemmatimonadetes_66_8_curated
prfB; peptide chain release factor 2
13_1_40cm_4_scaffold_1734_8

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5921..7393
DNA (1473bp) protein (491aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=uncultured bacterium W5-51b RepID=H9BX61_9BACT
Lysyl-tRNA synthetase
13_1_40cm_4_scaffold_1734_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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7390..8721
DNA (1332bp) protein (444aa)
ABC-type transport system protein n=1 Tax=uncultured bacterium W5-51b RepID=H9BX60_9BACT
lolC; lipoprotein releasing system transmembrane protein LolC; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
MacB-like periplasmic core domain protein
13_1_40cm_4_scaffold_1734_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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8718..9419
DNA (702bp) protein (234aa)
lolD; lipoprotein releasing system ATP-binding protein LolD; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=uncultured bacterium W5-51b RepID=H9BX59_9BACT
ABC transporter related protein
13_1_40cm_4_scaffold_1734_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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9419..9916
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium W5-51b RepID=H9BX58_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_1734_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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9913..10986
DNA (1074bp) protein (358aa)
hypothetical protein; K00936 [EC:2.7.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ATP:guanido phosphotransferase n=1 Tax=uncultured bacterium W5-51b RepID=H9BX57_9BACT
hypothetical protein
13_1_40cm_4_scaffold_1734_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11008..13488
DNA (2481bp) protein (827aa)
ATP-dependent Clp protease ATP-binding subunit ClpC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R6_GEMAT
clpC; ATP-dependent Clp protease ATP-binding subunit ClpC; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATPase AAA-2 domain protein
13_1_40cm_4_scaffold_1734_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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13566..15887
DNA (2322bp) protein (774aa)
Bacterial surface antigen (D15) family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R7_GEMAT
surface antigen; K07277 outer membrane protein Tax=GWC2_Gemmatimonadetes_71_10_curated
outer membrane protein assembly complex, YaeT protein
13_1_40cm_4_scaffold_1734_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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15911..16480
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=uncultured Gemmatimonadales bacterium HF0500_22O06 RepID=E7C5E1_9BACT
outer membrane chaperone Skp (OmpH) family protein; K06142 outer membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
outer membrane chaperone Skp (OmpH) family protein
13_1_40cm_4_scaffold_1734_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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16524..17570
DNA (1047bp) protein (349aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-); K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=GWC2_Gemmatimonadetes_71_10_curated
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R9_GEMAT
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
13_1_40cm_4_scaffold_1734_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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17563..18849
DNA (1287bp) protein (429aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyri
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S0_GEMAT
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase
13_1_40cm_4_scaffold_1734_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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18846..19613
DNA (768bp) protein (256aa)
lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=379066 species="Bacteria; Gemmatimonadetes;
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S1_GEMAT
13_1_40cm_4_scaffold_1734_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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19610..20587
DNA (978bp) protein (326aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S2_GEMAT
oxidoreductase domain protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AHG90760.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_1734_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

20584..21699
DNA (1116bp) protein (372aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=GWC2_Gemmatimonadetes_71_10_curated
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S3_GEMAT
13_1_40cm_4_scaffold_1734_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21696..22322
DNA (627bp) protein (209aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Bacteria RepID=E7C459_9BACT
hypothetical protein; K09778 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF374
13_1_40cm_4_scaffold_1734_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22319..23359
DNA (1041bp) protein (347aa)
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetraacyldisaccharide 4'-kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S5_GEMAT
Tetraacyldisaccharide 4'-kinase
13_1_40cm_4_scaffold_1734_23
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(23627..23917)
DNA (291bp) protein (97aa)
Tax=RBG_16_Actinobacteria_67_15_curated
13_1_40cm_4_scaffold_1734_24
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(23942..24118)
DNA (177bp) protein (59aa)
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
13_1_40cm_4_scaffold_1734_25
unknown

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comp(24254..24451)
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_4_scaffold_1734_26
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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24915..25094
DNA (180bp) protein (60aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rR
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Thiocapsa marina 5811 RepID=F9U7H7_9GAMM
rRNA large subunit methyltransferase
13_1_40cm_4_scaffold_1734_27
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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25222..25635
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6FIE7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EKO38387.1}; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovi
hypothetical protein
13_1_40cm_4_scaffold_1734_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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25661..27082
DNA (1422bp) protein (474aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=24468235 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
protein of unknown function UCP012535
13_1_40cm_4_scaffold_1734_29
unknown

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27230..27340
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_40cm_4_scaffold_1734_30
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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27343..28947
DNA (1605bp) protein (535aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YHS9_9DELT
integral membrane protein MviN; K03980 virulence factor Tax=RBG_13_Deltaproteobacteria_52_11b_curated
integral membrane protein MviN
Displaying items 1-30 of 35 in total

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