ggKbase home page

13_1_40cm_4_scaffold_19982

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_19982_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..450)
DNA (450bp) protein (150aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H7_GEMAT
putative ABC transporter permease protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
MacB-like periplasmic core domain protein
13_1_40cm_4_scaffold_19982_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(475..1704)
DNA (1230bp) protein (410aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H6_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH38186.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
13_1_40cm_4_scaffold_19982_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1707..2945)
DNA (1239bp) protein (413aa)
Putative ABC transporter permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H7_GEMAT
putative ABC transporter permease protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative ABC transporter permease protein
13_1_40cm_4_scaffold_19982_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2946..3677)
DNA (732bp) protein (244aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H8_GEMAT
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_19982_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3674..4954)
DNA (1281bp) protein (427aa)
Secretion protein HlyD family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H9_GEMAT
secretion protein HlyD family protein; K02005 HlyD family secretion protein Tax=GWC2_Gemmatimonadetes_71_10_curated
efflux transporter, RND family, MFP subunit
13_1_40cm_4_scaffold_19982_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4941..6425)
DNA (1485bp) protein (495aa)
Outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I0_GEMAT
outer membrane efflux protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
outer membrane efflux protein
13_1_40cm_4_scaffold_19982_7
unknown

Not on your lists

comp(6555..7211)
DNA (657bp) protein (219aa)

This feature has no annotations

13_1_40cm_4_scaffold_19982_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7208..7939)
DNA (732bp) protein (244aa)
creatininase; K01470 creatinine amidohydrolase [EC:3.5.2.10] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Creatininase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRU4_CLOPH
Creatininase
13_1_40cm_4_scaffold_19982_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7949..11950
DNA (4002bp) protein (1334aa)
Putative two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I2_GEMAT
putative two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative two-component histidine kinase
13_1_40cm_4_scaffold_19982_10
unknown

Not on your lists

12036..13379
DNA (1344bp) protein (448aa)

This feature has no annotations

13_1_40cm_4_scaffold_19982_11
unknown

Not on your lists

13390..13938
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_40cm_4_scaffold_19982_12
unknown

Not on your lists

comp(14503..14769)
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_4_scaffold_19982_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14964..15503
DNA (540bp) protein (180aa)
Bacterial group 1 Ig-like protein n=1 Tax=Paenibacillus sp. HGF5 RepID=F3M8G9_9BACL
Ig domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ig domain protein group 2 domain protein
13_1_40cm_4_scaffold_19982_14
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15503..17722
DNA (2220bp) protein (740aa)
YVTN beta-propeller repeat-containing protein Tax=GWC2_Geobacteraceae_53_11_curated
40-residue YVTN family beta-propeller
40-residue YVTN family beta-propeller repeat protein id=2349871 bin=GWA2_Planctomycete_KSU_39_15 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
13_1_40cm_4_scaffold_19982_15
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

17888..18454
DNA (567bp) protein (189aa)
ECF subfamily RNA polymerase sigma-24 subunit Tax=RBG_13_Ignavibacteria_36_8_curated
RNA polymerase sigma-70 factor id=2095281 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_4_scaffold_19982_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18518..19549
DNA (1032bp) protein (344aa)
Anti-FecI sigma factor, FecR n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHL0_RHOM4
FecR protein
FecR protein {ECO:0000313|EMBL:AHG89922.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_19982_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19566..20171
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000378F533
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AHG89923.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 17 items

View Taxonomy