ggKbase home page

13_1_40cm_4_scaffold_2265

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2265_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1..684
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Mycobacterium marinum MB2 RepID=S7S4A9_MYCMR
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_2265_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

707..2350
DNA (1644bp) protein (548aa)
Peptidase M28 n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QCN4_9CYAN
Predicted aminopeptidase {ECO:0000313|EMBL:CDM65305.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M28
13_1_40cm_4_scaffold_2265_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

2572..3645
DNA (1074bp) protein (358aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_2265_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3700..4368
DNA (669bp) protein (223aa)
Putative transcriptional regulator n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AAZ9_CARHZ
transcriptional regulator TrmB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_2265_5
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

4365..5300
DNA (936bp) protein (312aa)
Putative BchO protein n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5EI26_NOCAS
Uncharacterized protein {ECO:0000313|EMBL:KGM43297.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
putative alpha/beta superfamily hydrolase
13_1_40cm_4_scaffold_2265_6
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5343..5936
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003121337
Transcriptional regulator {ECO:0000313|EMBL:EHR02978.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium s
transcriptional regulator
13_1_40cm_4_scaffold_2265_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5952..8489)
DNA (2538bp) protein (846aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A719_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88939.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2265_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8619..11048)
DNA (2430bp) protein (810aa)
lon; ATP-dependent Lon protease (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Lon protease n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKJ4_SINAD
ATP-dependent protease La
13_1_40cm_4_scaffold_2265_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11300..13186
DNA (1887bp) protein (629aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAM0_GEMAT
protein kinase
13_1_40cm_4_scaffold_2265_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13183..16317)
DNA (3135bp) protein (1045aa)
spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] Tax=GWC2_Gemmatimonadetes_71_10_curated
Spermine synthase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4ULA0_ANASK
spermine synthase
13_1_40cm_4_scaffold_2265_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16381..19476)
DNA (3096bp) protein (1032aa)
spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] Tax=GWC2_Gemmatimonadetes_71_10_curated
spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] id=14429470 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin3_NC10 organism_group=NC10
spermine/spermidine synthase family protein
13_1_40cm_4_scaffold_2265_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19466..21586)
DNA (2121bp) protein (707aa)
2-oxo acid dehydrogenase E1 component alpha/beta subunit; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
2-oxo acid dehydrogenase E1 component alpha/beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABG2_GEMAT
2-oxo acid dehydrogenase E1 component alpha/beta subunit
13_1_40cm_4_scaffold_2265_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21601..23172)
DNA (1572bp) protein (524aa)
Carboxyl-terminal protease n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJP8_RHOM4
peptidase S41
Peptidase S41 {ECO:0000313|EMBL:AHG88092.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2265_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

23316..23774
DNA (459bp) protein (153aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEF4_THET1
flavin reductase domain-containing FMN-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
flavin reductase domain-containing FMN-binding protein
13_1_40cm_4_scaffold_2265_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23771..25423)
DNA (1653bp) protein (551aa)
hypothetical protein; K07047 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Amidohydrolase 3
amidohydrolase 3; K07047 id=24396407 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_1_40cm_4_scaffold_2265_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(25434..25703)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABH3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_2265_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25721..26977)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F366_CONWI
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_2265_18
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26996..27331
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMX6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL01915.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM
13_1_40cm_4_scaffold_2265_19
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(27288..28163)
DNA (876bp) protein (292aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Ch
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GDD9_CHLAD
ribosome small subunit-dependent GTPase A
13_1_40cm_4_scaffold_2265_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(28191..28490)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL7_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_2265_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(28520..28648)
DNA (129bp) protein (43aa)
putative proline dehydrogenase (EC:1.5.99.8); K00318 proline dehydrogenase [EC:1.5.99.8] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative proline dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL8_GEMAT
Proline dehydrogenase
Displaying 21 items

View Taxonomy