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13_1_40cm_4_scaffold_30

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_30_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..635)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A719_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_30_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(755..3238)
DNA (2484bp) protein (828aa)
lon; ATP-dependent Lon protease (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Lon protease n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKJ4_SINAD
ATP-dependent protease La
13_1_40cm_4_scaffold_30_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3457..5313
DNA (1857bp) protein (619aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAM0_GEMAT
protein kinase
13_1_40cm_4_scaffold_30_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5231..8314)
DNA (3084bp) protein (1028aa)
spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] Tax=GWC2_Gemmatimonadetes_71_10_curated
spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] id=14429470 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin3_NC10 organism_group=NC10
spermine synthase
13_1_40cm_4_scaffold_30_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8304..10424)
DNA (2121bp) protein (707aa)
2-oxo acid dehydrogenase E1 component alpha/beta subunit; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
2-oxo acid dehydrogenase E1 component alpha/beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABG2_GEMAT
2-oxo acid dehydrogenase E1 component alpha/beta subunit
13_1_40cm_4_scaffold_30_6
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

comp(10462..12792)
DNA (2331bp) protein (777aa)
peptidase M1 membrane alanine aminopeptidase id=1249848 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
peptidase M1 membrane alanine aminopeptidase Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
peptidase M1 membrane alanine aminopeptidase
13_1_40cm_4_scaffold_30_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12838..13320
DNA (483bp) protein (161aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEF4_THET1
flavin reductase domain-containing FMN-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
flavin reductase domain-containing FMN-binding protein
13_1_40cm_4_scaffold_30_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13337..14992)
DNA (1656bp) protein (552aa)
hypothetical protein; K07047 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Amidohydrolase 3
amidohydrolase 3; K07047 id=24396407 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_1_40cm_4_scaffold_30_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15002..15274)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABH3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_30_10
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15301..15831
DNA (531bp) protein (177aa)
Intracellular protease, PfpI family n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X3K0_DESRD
Pfpi family intracellular protease
Intracellular protease, PfpI family {ECO:0000313|EMBL:ACV68997.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" sourc
13_1_40cm_4_scaffold_30_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15808..17061)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F366_CONWI
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_30_12
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

17080..17394
DNA (315bp) protein (105aa)
MazG nucleotide pyrophosphohydrolase n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DPU4_9BACL
MazG nucleotide pyrophosphohydrolase Tax=RIFOXYA1_FULL_Alicyclobacillus_53_8_curated
MazG nucleotide pyrophosphohydrolase
13_1_40cm_4_scaffold_30_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

17495..18253
DNA (759bp) protein (253aa)
id=4014690 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
id=4014690 bin=GWF2_Lentisphaerae_57_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
13_1_40cm_4_scaffold_30_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

18264..19010
DNA (747bp) protein (249aa)
Phage shock protein A, PspA n=2 Tax=Rhodothermus marinus RepID=D0MK86_RHOM4
PspA/IM30 family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_4_scaffold_30_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

19041..20750
DNA (1710bp) protein (570aa)
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
OmpA/MotB domain protein id=4423694 bin=GWC2_ACD39_50_8 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_ACD39_50_8 organism_group=ACD39
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
13_1_40cm_4_scaffold_30_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

20758..21579
DNA (822bp) protein (274aa)
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Taurine ABC transporter permease id=4014693 bin=GWF2_Lentisphaerae_57_35 species=Psychroflexus torquis genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Binding-protein-dependent transport systems inner membrane component
13_1_40cm_4_scaffold_30_17
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21582..22469
DNA (888bp) protein (296aa)
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
ABC transporter related id=4014694 bin=GWF2_Lentisphaerae_57_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
ABC transporter
13_1_40cm_4_scaffold_30_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

22521..23414
DNA (894bp) protein (298aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
13_1_40cm_4_scaffold_30_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

23404..25194
DNA (1791bp) protein (597aa)
AAA family ATPase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CN83_MYXFH
ATPase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
AAA family ATPase
13_1_40cm_4_scaffold_30_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25204..25644)
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Rhodopseudomonas palustris RepID=Q6N2F0_RHOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE29541.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
13_1_40cm_4_scaffold_30_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(25829..26761)
DNA (933bp) protein (311aa)
rsgA; putative ribosome biogenesis GTPase RsgA (EC:3.6.1.-); K06949 ribosome biogenesis GTPase [EC:3.6.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RSGA_GEMAT
ribosome biogenesis GTPase RsgA
13_1_40cm_4_scaffold_30_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26752..27051)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL7_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_30_23
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(27081..28013)
DNA (933bp) protein (311aa)
putative proline dehydrogenase (EC:1.5.99.8)
Putative proline dehydrogenase {ECO:0000313|EMBL:BAH39895.1}; EC=1.5.5.2 {ECO:0000313|EMBL:BAH39895.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatim
Putative proline dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL8_GEMAT
13_1_40cm_4_scaffold_30_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(28035..30164)
DNA (2130bp) protein (710aa)
fadJ; multifunctional fatty acid oxidation complex subunit alpha; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] Tax=RIFCS
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB30_ANASK
fadJ; multifunctional fatty acid oxidation complex subunit alpha
13_1_40cm_4_scaffold_30_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(30164..31423)
DNA (1260bp) protein (420aa)
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16)
Acetyl-CoA acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM2_GEMAT
13_1_40cm_4_scaffold_30_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

31608..33233
DNA (1626bp) protein (542aa)
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycerol-3-phosphate dehydrogenase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJP9_MYXFH
glycerol-3-phosphate dehydrogenase
13_1_40cm_4_scaffold_30_27
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33289..34194
DNA (906bp) protein (302aa)
cytochrome C n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000378DB68
Cytochrome c family protein
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24660.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
13_1_40cm_4_scaffold_30_28
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34225..34920
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIZ7_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60081.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
13_1_40cm_4_scaffold_30_29
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

35033..36262
DNA (1230bp) protein (410aa)
galactokinase (EC:2.7.1.6)
Galactokinase {ECO:0000313|EMBL:ABJ87514.1}; EC=2.7.1.6 {ECO:0000313|EMBL:ABJ87514.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibac
Galactokinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01S56_SOLUE
13_1_40cm_4_scaffold_30_30
unknown

Not on your lists

comp(36294..36554)
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

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