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13_1_40cm_4_scaffold_3810

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3810_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2..673
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7D7_GEMAT
hypothetical protein; K06167 PhnP protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
beta-lactamase domain protein
13_1_40cm_4_scaffold_3810_2
unknown

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comp(670..1632)
DNA (963bp) protein (321aa)

This feature has no annotations

13_1_40cm_4_scaffold_3810_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2405..3295
DNA (891bp) protein (297aa)
tRNA-processing ribonuclease BN n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E1_GEMAT
membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribonuclease BN
13_1_40cm_4_scaffold_3810_4
unknown

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3292..3393
DNA (102bp) protein (34aa)

This feature has no annotations

13_1_40cm_4_scaffold_3810_5
Chlamydomonas reinhardtii, Chlamydomonas, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

3390..4976
DNA (1587bp) protein (529aa)
Plus agglutinin n=2 Tax=Chlamydomonas reinhardtii RepID=Q6SSE6_CHLRE
Plus agglutinin {ECO:0000313|EMBL:AAS07044.1}; TaxID=3055 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas.;" source="Chlamydomonas r
collagen triple helix repeat-containing protein
13_1_40cm_4_scaffold_3810_6
unknown

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4979..5974
DNA (996bp) protein (332aa)

This feature has no annotations

13_1_40cm_4_scaffold_3810_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6199..7878
DNA (1680bp) protein (560aa)
dnaX; DNA polymerase III gamma and tau subunit (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA polymerase III gamma and tau subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E4_GEMAT
DNA polymerase III, subunits gamma and tau
13_1_40cm_4_scaffold_3810_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7916..8233
DNA (318bp) protein (106aa)
Nucleoid-associated protein GAU_1113 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=Y1113_GEMAT
hypothetical protein; K09747 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0133 protein ybaB
13_1_40cm_4_scaffold_3810_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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8240..8842
DNA (603bp) protein (201aa)
Recombination protein RecR n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E6_GEMAT
recR; recombination protein RecR; K06187 recombination protein RecR Tax=GWC2_Gemmatimonadetes_71_10_curated
recR; recombination protein RecR
13_1_40cm_4_scaffold_3810_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8855..9340
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E7_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Roadblock/LC7 family protein
13_1_40cm_4_scaffold_3810_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9356..10030
DNA (675bp) protein (225aa)
Gliding motility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E8_GEMAT
gliding motility protein; K06883 Tax=RBG_16_Gemmatimonadetes_66_8_curated
gliding motility protein
13_1_40cm_4_scaffold_3810_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

10042..10683
DNA (642bp) protein (214aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=GWC2_Gemmatimonadetes_
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7E9_GEMAT
13_1_40cm_4_scaffold_3810_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10680..11963
DNA (1284bp) protein (428aa)
CinA-like protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=CINAL_GEMAT
CinA-like protein; K03742 competence/damage-inducible protein CinA Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Competence-damaged protein
13_1_40cm_4_scaffold_3810_14
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11963..12787
DNA (825bp) protein (275aa)
Lipase n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M4Q1_9BACL
Lipase {ECO:0000313|EMBL:EST52865.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
lysophospholipase
13_1_40cm_4_scaffold_3810_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12947..13567
DNA (621bp) protein (207aa)
Protein GrpE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7F5_GEMAT
grpE; GrpE protein; K03687 molecular chaperone GrpE Tax=RBG_16_Gemmatimonadetes_66_8_curated
Protein grpE
13_1_40cm_4_scaffold_3810_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13869..14630
DNA (762bp) protein (254aa)
Chaperone protein DnaJ n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7F6_GEMAT
dnaJ; chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
dnaJ; chaperone protein DnaJ
13_1_40cm_4_scaffold_3810_17
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(14662..15675)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI0003822D9D
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EFH88108.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" s
alcohol dehydrogenase
13_1_40cm_4_scaffold_3810_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15672..16109)
DNA (438bp) protein (146aa)
N-acetyltransferase GCN5; K00619 amino-acid N-acetyltransferase [EC:2.3.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
GCN5-related N-acetyltransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AS40_RUBXD
N-acetyltransferase GCN5
13_1_40cm_4_scaffold_3810_trna_1
unknown

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16237..16309
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_3810_19
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16347..17003
DNA (657bp) protein (219aa)
hemolysin III family channel protein; K11068 hemolysin III Tax=RBG_16_Gammaproteobacteria_51_14_curated
hemolysin III family channel protein; K11068 hemolysin III id=14624112 bin=bin5_DeltaP species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
hemolysin-like protein
13_1_40cm_4_scaffold_3810_20
unknown

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comp(17012..17224)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_4_scaffold_3810_21
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17428..17868)
DNA (441bp) protein (147aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
Putative uncharacterized protein id=2637582 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_1_40cm_4_scaffold_3810_22
unknown

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comp(17865..18143)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_4_scaffold_3810_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(18177..19007)
DNA (831bp) protein (277aa)
putative amino acid aldolase or racemase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative amino acid aldolase or racemase id=4650281 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
alanine racemase domain-containing protein
Displaying 24 items

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