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13_1_40cm_4_scaffold_4422

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4422_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2..1528
DNA (1527bp) protein (509aa)
NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W0_GEMAT
NtrC family two-component response regulator
NtrC family two-component response regulator {ECO:0000313|EMBL:BAH37620.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas
13_1_40cm_4_scaffold_4422_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1547..2350
DNA (804bp) protein (268aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5V9_GEMAT
ATP-binding region ATPase domain protein
13_1_40cm_4_scaffold_4422_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2354..3235
DNA (882bp) protein (294aa)
putative glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase {ECO:0000313|EMBL:BAH37627.1}; EC=2.4.-.- {ECO:0000313|EMBL:BAH37627.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimon
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W7_GEMAT
13_1_40cm_4_scaffold_4422_4
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

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3232..4044
DNA (813bp) protein (271aa)
formyl transferase n=1 Tax=Schlesneria paludicola RepID=UPI00029A8E05
hypothetical protein
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO45443.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
13_1_40cm_4_scaffold_4422_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4016..4930
DNA (915bp) protein (305aa)
Putative xylanase/chitin deacetylase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YY98_9RHIZ
Putative xylanase/chitin deacetylase {ECO:0000313|EMBL:EIM28940.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvi
polysaccharide deacetylase
13_1_40cm_4_scaffold_4422_6
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4811..5995)
DNA (1185bp) protein (395aa)
Glycosyl transferase family protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GVA0_THISH
glycosyl transferase
Glycosyl transferase family protein {ECO:0000313|EMBL:ACL73446.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source
13_1_40cm_4_scaffold_4422_7

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comp(5992..6657)
DNA (666bp) protein (222aa)
Glycosyl transferase group 1 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HA86_ANADF
Marine sediment metagenome DNA, contig: S01H1_L01779 {ECO:0000313|EMBL:GAF84610.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
group 1 glycosyl transferase
13_1_40cm_4_scaffold_4422_8
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

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comp(6928..8343)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L556_MAGSM
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
hypothetical protein
13_1_40cm_4_scaffold_4422_9
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(8435..9145)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XCZ3_9CHRO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ29941.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
13_1_40cm_4_scaffold_4422_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9324..12245
DNA (2922bp) protein (974aa)
Polysaccharide biosynthesis protein n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AHL3_NITEC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90020.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_4422_11
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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12230..14194
DNA (1965bp) protein (655aa)
Asparagine synthetase id=2047554 bin=GWB2_Desulfobacterales_56_26 species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
asparagine synthase, glutamine-hydrolyzing Tax=GWB2_Desulfobacterales_56_26_curated
asparagine synthase
13_1_40cm_4_scaffold_4422_12
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14191..16023
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000366A1AD
asparagine synthase Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
asparagine synthase
13_1_40cm_4_scaffold_4422_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16007..17518
DNA (1512bp) protein (504aa)
Polysaccharide biosynthesis protein n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AHL3_NITEC
polysaccharide biosynthesis protein
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AHG90016.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_4422_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(17524..18249)
DNA (726bp) protein (242aa)
Putative uncharacterized protein id=2268983 bin=GWB2_Proteobacteria_55_19 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42563.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_4422_15
Marinobacter lipolyticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18264..18710)
DNA (447bp) protein (149aa)
Putative uncharacterized protein id=2268983 bin=GWB2_Proteobacteria_55_19 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
ATP-grasp protein {ECO:0000313|EMBL:EON92751.1}; TaxID=1318628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter lipolytic
hypothetical protein
13_1_40cm_4_scaffold_4422_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

18845..20866
DNA (2022bp) protein (674aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIL2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43099.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_4422_17
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

20860..22203
DNA (1344bp) protein (448aa)
O-antigen polymerase n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JCA8_DESDE
O-antigen polymerase Tax=RBG_16_Zixibacteria_53_22_curated
O-antigen polymerase family protein
13_1_40cm_4_scaffold_4422_18
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22227..23423
DNA (1197bp) protein (399aa)
Glycosyl transferase family 2 id=2302448 bin=GWB2_Desulfobacterales_56_26 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
glycosyl transferase family 2 protein Tax=GWB2_Desulfobacterales_56_26_curated
glycosyl transferase family 2 protein
13_1_40cm_4_scaffold_4422_19
unknown

Not on your lists

comp(23655..23777)
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 19 items

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