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13_1_40cm_4_scaffold_4882

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4882_1
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

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comp(3..1196)
DNA (1194bp) protein (398aa)
selenocysteine-specific translation elongation factor (EC:2.7.7.4)
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:AEH45959.1}; EC=2.7.7.4 {ECO:0000313|EMBL:AEH45959.1};; TaxID=667014 species="Bacteria; Thermodesulfobacteria; Thermodesulfobact
translation elongation factor n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B459BE
13_1_40cm_4_scaffold_4882_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1178..1969)
DNA (792bp) protein (264aa)
DNA repair protein RecO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8H2_GEMAT
DNA repair protein recO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;"
13_1_40cm_4_scaffold_4882_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1996..3972)
DNA (1977bp) protein (659aa)
Putative TonB-dependent outer membrane receptor for cobalamin and Fe transport n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHA1_9BACT
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AHG90671.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_4882_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3986..4789)
DNA (804bp) protein (268aa)
btuC; putative vitamin B12 transport protein BtuD; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative vitamin B12 transport protein BtuD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5M7_GEMAT
btuC; putative vitamin B12 transport protein BtuD
13_1_40cm_4_scaffold_4882_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(4774..5715)
DNA (942bp) protein (314aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJF5_9PROT
transmembrane ABC transporter protein,permease; K02015 iron complex transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
iron ABC transporter
13_1_40cm_4_scaffold_4882_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(5712..6698)
DNA (987bp) protein (329aa)
ABC Fe3+siderophore/cobalamin transporter, periplasmic ligand binding protein n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39DU1_BURS3
ABC transporter substrate-binding protein; K02016 iron complex transport system substrate-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC-type transporter, periplasmic subunit
13_1_40cm_4_scaffold_4882_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(6923..7912)
DNA (990bp) protein (330aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_4882_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(7923..8420)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G7_GEMAT
hypothetical protein; K08999 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF151
13_1_40cm_4_scaffold_4882_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(8435..9784)
DNA (1350bp) protein (450aa)
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=delta proteobacterium NaphS2 RepID=D8FF04_9DELT
adenosylhomocysteinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_4882_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9781..10995)
DNA (1215bp) protein (405aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G6_GEMAT
S-adenosylmethionine synthase
13_1_40cm_4_scaffold_4882_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(11009..12805)
DNA (1797bp) protein (599aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G5_GEMAT
phosphoenolpyruvate-protein phosphotransferase
13_1_40cm_4_scaffold_4882_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(12802..13137)
DNA (336bp) protein (112aa)
ptsH; phosphocarrier protein HPr; K11189 phosphocarrier protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ptsH; phosphocarrier protein HPr; K11189 phosphocarrier protein id=7200581 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
HPrNtr
13_1_40cm_4_scaffold_4882_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(13128..13883)
DNA (756bp) protein (252aa)
Phosphotransferase system enzyme IID component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G3_GEMAT
phosphotransferase system enzyme IID component; K02796 PTS system, mannose-specific IID component Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phosphotransferase system enzyme IID component
13_1_40cm_4_scaffold_4882_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(13871..14548)
DNA (678bp) protein (226aa)
Putative phosphotransferase system enzyme IIC component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G2_GEMAT
phosphotransferase system PTS sorbose-specific IIC subunit
Phosphotransferase system PTS sorbose-specific IIC subunit {ECO:0000313|EMBL:AHG90661.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_4882_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(14545..14703)
DNA (159bp) protein (53aa)
Phosphotransferase system enzyme IIB component n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G1_GEMAT
phosphotransferase system enzyme IIB component Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PTS system sorbose subfamily IIB component
Displaying 15 items

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