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13_1_40cm_4_scaffold_543

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_543_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1..549
DNA (549bp) protein (183aa)
cbs; cystathionine beta-synthase (EC:4.2.1.22); K01697 cystathionine beta-synthase [EC:4.2.1.22] Tax=RBG_16_Gemmatimonadetes_66_8_curated
cbs; cystathionine beta-synthase (EC:4.2.1.22)
Cystathionine beta-synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM2_GEMAT
13_1_40cm_4_scaffold_543_2

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549..1577
DNA (1029bp) protein (343aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0JEF6_9PSED
D-alanine--D-alanine ligase
13_1_40cm_4_scaffold_543_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1607..2434
DNA (828bp) protein (276aa)
Rhomboid family protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MLX6_9BACT
rhomboid family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Peptidase S54, rhomboid domain protein
13_1_40cm_4_scaffold_543_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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2442..3068
DNA (627bp) protein (209aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_543_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3047..4324
DNA (1278bp) protein (426aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_543_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4378..5322
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEP5_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_543_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5319..5519
DNA (201bp) protein (67aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_543_8

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5740..6255
DNA (516bp) protein (172aa)
Formaldehyde activating enzyme n=2 Tax=environmental samples RepID=Q4JIT8_9BACT
Formaldehyde activating enzyme {ECO:0000313|EMBL:AAY96673.1}; TaxID=333425 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-4.;"
formaldehyde-activating enzyme
13_1_40cm_4_scaffold_543_9

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6353..6592
DNA (240bp) protein (80aa)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5)
NADP-linked methylene tetrahydromethanopterin dehydrogenase n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIQ9_9BACT
NADP-linked methylene tetrahydromethanopterin dehydrogenase {ECO:0000313|EMBL:AAY89253.1}; TaxID=333371 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC-L1N9.;"
13_1_40cm_4_scaffold_543_10

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6592..7200
DNA (609bp) protein (203aa)
mtdA; NADP-dependent methylene-tetrahydromethanopterin/methylene-tetrahydrofolate dehydrogenase (EC:1.5.1.-)
NADP-linked methylene tetrahydromethanopterin dehydrogenase n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIQ0_9BACT
NADP-linked methylene tetrahydromethanopterin dehydrogenase {ECO:0000313|EMBL:AAY89264.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
13_1_40cm_4_scaffold_543_11

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7205..8290
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIP9_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY89265.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
predicted butyrate kinase
13_1_40cm_4_scaffold_543_12

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8287..9447
DNA (1161bp) protein (387aa)
OrfY n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIP8_9BACT
OrfY {ECO:0000313|EMBL:AAY89266.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
hypothetical protein
13_1_40cm_4_scaffold_543_13

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9444..10694
DNA (1251bp) protein (417aa)
Formyltransferase/hydrolase complex subunit B n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIT2_9BACT
Formyltransferase/hydrolase complex subunit B {ECO:0000313|EMBL:AAY96679.1}; TaxID=333425 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-4.;"
formylmethanofuran dehydrogenase subunit B
13_1_40cm_4_scaffold_543_14
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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10691..12325
DNA (1635bp) protein (545aa)
endonuclease n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C45AF
fhcA; formyltransferase/hydrolase complex subunit alpha (fhcA) Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
formylmethanofuran dehydrogenase subunit A
13_1_40cm_4_scaffold_543_15

Not on your lists

12322..13212
DNA (891bp) protein (297aa)
formylmethanofuran--tetrahydromethanopterin formyltransferase (EC:2.3.1.101)
Formyltransferase/hydrolase complex subunit D (Fragment) n=1 Tax=uncultured bacterium RepID=Q52UU7_9BACT
Formyltransferase/hydrolase complex subunit D {ECO:0000313|EMBL:AAX93743.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_4_scaffold_543_16
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13209..13973
DNA (765bp) protein (255aa)
fhcC; formyltransferase/hydrolase complex subunit gamma (fhcC) (EC:1.2.99.5) Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
fhcC; formyltransferase/hydrolase complex subunit gamma (fhcC) (EC:1.2.99.5) id=14429007 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
fhcC; formyltransferase/hydrolase complex subunit gamma (fhcC) (EC:1.2.99.5)
13_1_40cm_4_scaffold_543_17

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13970..14935
DNA (966bp) protein (322aa)
Methenyltetrahydromethanopterin cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; EC=3.5.4.27 {ECO:0000256|HAMAP-Rule:MF_00486};; Methenyl-H4MPT cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; TaxID
mch; methenyltetrahydromethanopterin cyclohydrolase (Methenyl-H4MPT cyclohydrolase) (mch) (EC:3.5.4.27)
Methylene tetrahydromethanopterin cyclohydrolase n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN5_9BACT
13_1_40cm_4_scaffold_543_18
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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14974..15375
DNA (402bp) protein (134aa)
Ethyl tert-butyl ether degradation EthD n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J3H5_CYCMS
ethyl tert-butyl ether degradation EthD Tax=RBG_16_Anaeromyxobacter_69_14_curated
ethyl tert-butyl ether degradation EthD
13_1_40cm_4_scaffold_543_19

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15541..16242
DNA (702bp) protein (234aa)
Orf5 n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN4_9BACT
Orf5 {ECO:0000313|EMBL:AAY89280.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
alpha-L-glutamate ligase
13_1_40cm_4_scaffold_543_20

Not on your lists

16344..17153
DNA (810bp) protein (270aa)
Triphosphoribosyl-dephospho-CoA synthase {ECO:0000256|SAAS:SAAS00100821}; EC=2.4.2.52 {ECO:0000256|SAAS:SAAS00100821};; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bact
Orf7 n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN3_9BACT
Triphosphoribosyl-dephospho-CoA synthetase
13_1_40cm_4_scaffold_543_21
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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17140..17643
DNA (504bp) protein (168aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Putative 6-pyruvoyl tetrahydropterin synthase n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIS7_9BACT
6-pyruvoyl-tetrahydropterin synthase
13_1_40cm_4_scaffold_543_22

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comp(17622..18404)
DNA (783bp) protein (261aa)
Orf17 n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN2_9BACT
Orf17 {ECO:0000313|EMBL:AAY89282.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
hisA/hisF family protein
13_1_40cm_4_scaffold_543_23

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18431..19462
DNA (1032bp) protein (344aa)
Conserved protein Orf9 n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIS5_9BACT
Conserved protein Orf9 {ECO:0000313|EMBL:AAY96686.1}; TaxID=333425 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-4.;"
tetrahydromethanopterin biosynthesis protein
13_1_40cm_4_scaffold_543_24
CSP1_5_NC10, NC10, Bacteria

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19459..20076
DNA (618bp) protein (206aa)
Delta 1-pyrroline-5-carboxylate synthetase id=14429018 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Delta 1-pyrroline-5-carboxylate synthetase Tax=CSP1_5_NC10
putative kinase, aspartokinase/uridylate kinase
13_1_40cm_4_scaffold_543_25
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20026..20745)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKC5_9BACT
Contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIX12139.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source=
hypothetical protein
13_1_40cm_4_scaffold_543_26
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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20863..22536
DNA (1674bp) protein (558aa)
L-lactate transport n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HA99_ANADF
L-lactate transport
L-lactate transport {ECO:0000313|EMBL:ABS25645.1}; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaero
13_1_40cm_4_scaffold_543_27
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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22551..23387
DNA (837bp) protein (279aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0X2_NITHN
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADE14529.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitros
13_1_40cm_4_scaffold_543_28
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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23409..23768
DNA (360bp) protein (120aa)
4a-hydroxytetrahydrobiopterin dehydratase {ECO:0000256|SAAS:SAAS00118034}; EC=4.2.1.96 {ECO:0000256|SAAS:SAAS00118034};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetale
Pterin-4a-carbinolamine dehydratase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJV0_SINAD
pterin-4a-carbinolamine dehydratase
13_1_40cm_4_scaffold_543_29
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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23765..25204
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJW5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67548.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_4_scaffold_543_30
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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25201..26667
DNA (1467bp) protein (489aa)
Anthranilate synthase component 1 {ECO:0000313|EMBL:EQB29047.1}; EC=4.1.3.27 {ECO:0000313|EMBL:EQB29047.1};; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellacea
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E6109E
para-aminobenzoate synthase subunit I
Displaying items 1-30 of 34 in total

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