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13_1_40cm_4_scaffold_67

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Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_67_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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243..1070
DNA (828bp) protein (276aa)
GTPase Era n=1 Tax=uncultured Gemmatimonadales bacterium HF4000_15H13 RepID=E7C887_9BACT
era; GTP-binding protein Era; K03595 GTP-binding protein Era Tax=RBG_16_Gemmatimonadetes_66_8_curated
GTP-binding protein Era-like-protein
13_1_40cm_4_scaffold_67_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1067..1237
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Marinimicrobia RepID=UPI00037F8F7F
hypothetical protein; K09791 hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_67_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1218..2270
DNA (1053bp) protein (351aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium W5-51b RepID=H9BX65_9BACT
hypothetical protein
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_67_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2272..3099
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q7_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38617.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_4_scaffold_67_5
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3100..4146
DNA (1047bp) protein (349aa)
Calcium/proton exchanger n=1 Tax=Desulfosporosinus sp. OT RepID=G2FXL8_9FIRM
Calcium/proton exchanger {ECO:0000313|EMBL:EGW37670.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
calcium/proton exchanger Cax
13_1_40cm_4_scaffold_67_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4204..5169
DNA (966bp) protein (322aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=uncultured bacterium W5-51b RepID=H9BX64_9BACT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_67_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5720..6001
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q9_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
MJ0042 family finger-like protein
13_1_40cm_4_scaffold_67_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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6122..7120
DNA (999bp) protein (333aa)
Protein chain release factor B n=1 Tax=uncultured Gemmatimonadales bacterium HF4000_15H13 RepID=E7C880_9BACT
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptide chain release factor 2
13_1_40cm_4_scaffold_67_9

Not on your lists

7117..8589
DNA (1473bp) protein (491aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=uncultured bacterium W5-51b RepID=H9BX61_9BACT
Lysyl-tRNA synthetase
13_1_40cm_4_scaffold_67_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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8586..9923
DNA (1338bp) protein (446aa)
ABC-type transport system protein n=1 Tax=uncultured bacterium W5-51b RepID=H9BX60_9BACT
lolC; lipoprotein releasing system transmembrane protein LolC; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
MacB-like periplasmic core domain protein
13_1_40cm_4_scaffold_67_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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9920..10621
DNA (702bp) protein (234aa)
lolD; lipoprotein releasing system ATP-binding protein LolD; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=uncultured bacterium W5-51b RepID=H9BX59_9BACT
ABC transporter related protein
13_1_40cm_4_scaffold_67_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10621..11118
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium W5-51b RepID=H9BX58_9BACT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_4_scaffold_67_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11115..12188
DNA (1074bp) protein (358aa)
hypothetical protein; K00936 [EC:2.7.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ATP:guanido phosphotransferase n=1 Tax=uncultured bacterium W5-51b RepID=H9BX57_9BACT
ATP:guanido phosphotransferase, catalytic domain-containing protein
13_1_40cm_4_scaffold_67_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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12201..14681
DNA (2481bp) protein (827aa)
ATP-dependent Clp protease ATP-binding subunit ClpC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R6_GEMAT
clpC; ATP-dependent Clp protease ATP-binding subunit ClpC; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATPase AAA-2 domain protein
13_1_40cm_4_scaffold_67_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14678..17074
DNA (2397bp) protein (799aa)
Bacterial surface antigen (D15) family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R7_GEMAT
surface antigen; K07277 outer membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
outer membrane protein assembly complex, YaeT protein
13_1_40cm_4_scaffold_67_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17137..17679
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=uncultured Gemmatimonadales bacterium HF0500_22O06 RepID=E7C5E1_9BACT
outer membrane chaperone skp (omph); K06142 outer membrane protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
outer membrane chaperone Skp (OmpH)
13_1_40cm_4_scaffold_67_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17694..18734
DNA (1041bp) protein (347aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-); K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=GWC2_Gemmatimonadetes_71_10_curated
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R9_GEMAT
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
13_1_40cm_4_scaffold_67_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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18760..20007
DNA (1248bp) protein (416aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyri
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S0_GEMAT
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase
13_1_40cm_4_scaffold_67_19
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20004..20771
DNA (768bp) protein (256aa)
lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=379066 species="Bacteria; Gemmatimonadetes;
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S1_GEMAT
13_1_40cm_4_scaffold_67_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20768..21751
DNA (984bp) protein (328aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S2_GEMAT
oxidoreductase domain protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AHG90760.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_67_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

21748..22875
DNA (1128bp) protein (376aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=GWC2_Gemmatimonadetes_71_10_curated
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S3_GEMAT
13_1_40cm_4_scaffold_67_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22872..23525
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U4M9_9PROT id=5224129 bin=16ft_combo_ws3_JS1 species=Magnetospirillum gryphiswaldense genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein; K09778 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF374
13_1_40cm_4_scaffold_67_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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23522..24547
DNA (1026bp) protein (342aa)
lpxK; tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Tetraacyldisaccharide 4'-kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S5_GEMAT
Tetraacyldisaccharide 4'-kinase
13_1_40cm_4_scaffold_67_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

24558..25829
DNA (1272bp) protein (424aa)
glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glutamate dehydrogenase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NSQ3_GRAMM
Glu/Leu/Phe/Val dehydrogenase
13_1_40cm_4_scaffold_67_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25829..26254
DNA (426bp) protein (142aa)
hypothetical protein; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XX96_SORCE
50S rRNA methyltransferase
13_1_40cm_4_scaffold_67_26
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

26208..26801
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RPB4_SPITD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADN01308.1}; TaxID=665571 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 49972
13_1_40cm_4_scaffold_67_27
unknown

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26798..26887
DNA (90bp) protein (30aa)

This feature has no annotations

13_1_40cm_4_scaffold_67_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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26884..28308
DNA (1425bp) protein (475aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=24468235 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
protein of unknown function UCP012535
13_1_40cm_4_scaffold_67_29
unknown

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28319..28582
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_4_scaffold_67_30
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28579..30144
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S9_GEMAT
integral membrane protein MviN; K03980 virulence factor Tax=RBG_13_Deltaproteobacteria_52_11b_curated
hypothetical protein
Displaying items 1-30 of 41 in total

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