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13_1_40cm_4_scaffold_7

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..1550)
DNA (1548bp) protein (516aa)
Putative response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A620_GEMAT
putative response regulator Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative response regulator
13_1_40cm_4_scaffold_7_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1609..2604
DNA (996bp) protein (332aa)
Glycosyl transferase family 9 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XV96_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETW99321.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
family 9 glycosyl transferase
13_1_40cm_4_scaffold_7_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2601..2978
DNA (378bp) protein (126aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_7_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3024..3902
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A618_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_7_5
unknown

Not on your lists

comp(3854..4303)
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_4_scaffold_7_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4440..5189
DNA (750bp) protein (250aa)
Probable transcriptional regulatory protein GAU_0635 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=Y635_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0082 protein yeeN
13_1_40cm_4_scaffold_7_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5191..5667
DNA (477bp) protein (159aa)
ruvC; Holliday junction endonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ruvC; Holliday junction endonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A616_GEMAT
13_1_40cm_4_scaffold_7_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5675..6271
DNA (597bp) protein (199aa)
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00036780A7
Holliday junction ATP-dependent DNA helicase ruvA
13_1_40cm_4_scaffold_7_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6470..7510
DNA (1041bp) protein (347aa)
ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RUVB_GEMAT
Holliday junction ATP-dependent DNA helicase ruvB
13_1_40cm_4_scaffold_7_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7622..8671
DNA (1050bp) protein (350aa)
S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) PF0_DESK7">RepID=F6CPF0_DESK7
S-adenosylmethionine--tRNA ribosyltransferase-isomerase
13_1_40cm_4_scaffold_7_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8686..9930
DNA (1245bp) protein (415aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Queuine tRNA-ribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A609_GEMAT
Queuine tRNA-ribosyltransferase
13_1_40cm_4_scaffold_7_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9933..10259
DNA (327bp) protein (109aa)
Preprotein translocase YajC subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A608_GEMAT
yajC; preprotein translocase YajC subunit; K03210 preprotein translocase subunit YajC Tax=RBG_16_Gemmatimonadetes_66_8_curated
yajC; preprotein translocase YajC subunit
13_1_40cm_4_scaffold_7_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10256..10804
DNA (549bp) protein (183aa)
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RBG_16_Gemmatimonadetes_66_8_curated
def; peptide deformylase Def (EC:3.5.1.88)
peptide deformylase n=1 Tax=Rhizobium giardinii RepID=UPI00036085A2
13_1_40cm_4_scaffold_7_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10805..11728
DNA (924bp) protein (308aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Methionyl-tRNA formyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A606_GEMAT
Methionyl-tRNA formyltransferase
13_1_40cm_4_scaffold_7_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

11725..12345
DNA (621bp) protein (207aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IKV3_ANADE
13_1_40cm_4_scaffold_7_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

12342..12554
DNA (213bp) protein (71aa)
Thiazole synthase n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SL89_RHOPH
thiamine biosynthesis protein ThiS Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
thiG; Thiazole biosynthesis protein thiG
13_1_40cm_4_scaffold_7_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12559..13356
DNA (798bp) protein (266aa)
thiG; thiazole biosynthesis protein thiG Tax=RBG_16_Gemmatimonadetes_66_8_curated
Thiazole synthase id=3894134 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
thiG; thiazole synthase
13_1_40cm_4_scaffold_7_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13391..14632
DNA (1242bp) protein (414aa)
putative rRNA methyltransferase (EC:2.1.1.-); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative rRNA methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A605_GEMAT
sun protein
13_1_40cm_4_scaffold_7_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14632..15402
DNA (771bp) protein (257aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Serine/threonine protein kinase n=2 Tax=Thermobifida fusca RepID=Q47KC3_THEFY
serine/threonine protein kinase
13_1_40cm_4_scaffold_7_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15399..16070
DNA (672bp) protein (224aa)
ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Ribulose-phosphate 3-epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A603_GEMAT
ribulose-phosphate 3-epimerase
13_1_40cm_4_scaffold_7_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

16067..16603
DNA (537bp) protein (179aa)
Thiol-disulfide oxidoreductase ResA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A602_GEMAT
resA; thiol-disulfide oxidoreductase ResA Tax=GWC2_Gemmatimonadetes_71_10_curated
resA; thiol-disulfide oxidoreductase ResA
13_1_40cm_4_scaffold_7_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16593..17522
DNA (930bp) protein (310aa)
YbbR family protein n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A8F6_THEID
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
YbbR family protein
13_1_40cm_4_scaffold_7_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


17515..18576
DNA (1062bp) protein (354aa)
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=TSAD_GEMAT
O-sialoglycoprotein endopeptidase
13_1_40cm_4_scaffold_7_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18573..19412
DNA (840bp) protein (280aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-); K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A600_GEMAT
13_1_40cm_4_scaffold_7_25
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

19412..21055
DNA (1644bp) protein (548aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000344DC81
amidohydrolase Tax=RBG_16_Ignavibacteria_36_9_curated
hypothetical protein
13_1_40cm_4_scaffold_7_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21060..21464)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00037CFB19
iron permease FTR1; K07243 high-affinity iron transporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
iron permease FTR1
13_1_40cm_4_scaffold_7_27
unknown

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comp(21747..22373)
DNA (627bp) protein (209aa)

This feature has no annotations

13_1_40cm_4_scaffold_7_28
unknown

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22814..23110
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_40cm_4_scaffold_7_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(23143..23514)
DNA (372bp) protein (124aa)
holo-acyl-carrier-protein synthase (EC:2.7.8.7); K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RBG_16_Gemmatimonadetes_66_8_curated
4''''-phosphopantetheinyl transferase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B3E97D
holo-(acyl-carrier-protein) synthase
13_1_40cm_4_scaffold_7_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23578..24309)
DNA (732bp) protein (244aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying items 1-30 of 82 in total

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