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13_1_20cm_4_scaffold_448_10

Organism: 13_1_20CM_4_Gemmatimonadetes_69_16

partial RP 27 / 55 BSCG 26 / 51 ASCG 10 / 38
Location: comp(8769..10493)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A406_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 565.0
  • Bit_score: 863
  • Evalue 1.00e-247
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 554.0
  • Bit_score: 883
  • Evalue 2.30e-253
RNA binding S1 domain protein similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 565.0
  • Bit_score: 867
  • Evalue 2.60e-249

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1725
ATGCTGGTAGATACTCAGGACCTTCCGGAATCCAAAGCCGAAGGTCCGGCTGCGCCGACCGCTCATTCCCACCTGCGCGTCCGTCCCGATCTCCACGAAGAGTACTCGCCGGACGAAATCGCCAAGATGACCGAGATGTACGAGGGGACACTCTCGAACATCGAGGAGGGCGAGATCGTCAAGTCGAAAGTGCTGCGCGTGACGGATACCGCCGTCATCCTGGACGTGGGATTCAAGTCCGAGGGCGCCGTCCCGATCGACGAGTTCAAGGACGCGCACTCGCTCAAGGAAGGGGACGAGGTCGAGGTCTTCCTCGAGCACCTGGAGGATCAAGAGGGCGCGGTCGTCCTGTCGAAGAAGAAGGCCGACTTCATGCGGGTGTGGGAACGCATCCGCGAGGCCCACGAGAAGGACGAGGCGGTGAGCGGGACGCTGGTGAAGAAGATCAAGGGCGGCGTGGTGGTGGACTTGATGGGAGTGGACGCCTTCCTCCCCGGCAGCCAGATCGCGCTGCGCCGCGTCCCCAACATCGACGAGCTGCTCGGCCAGAGTTTCGAGTTCAAGATTATCAAGCTCAACAAGCGGCGTCGCAACATCGTCGTCTCGCGCCGCGTGCTGCTCGAGGCGGAGCGCAAGACCAAGCGCGACGTGCTGATGAAGGAGCTCCAGGTCGGCCAGGTGCGCAAGGGGATCGTGAAGAACATCACCGATTTCGGCGCCTTCATCGACCTCGGGGGCGTCGACGGCCTGCTGCACATCACCGATATGAGCTACGGCCGGGTCTCACACCCGTCCGAGCTCGTGCACATCGGGCAGGAGGTCGAGGTCAAAGTGCTCGACATCGACTGGGAGCGCGAGCGCATCAGCCTCGGCCTGAAGCAGCTGCAGCCGTATCCGTGGAAAGATGTGGCCGCGAAGTATCCCGTCGGGACCCGCGTGCAGGGGAAGGTGGTCTCGATCACCAACTACGGCGCGTTCGTCGAGCTCGAGCCCGGCATCGAGGGCCTGGTGCACATCTCGGAGATGAGCTGGACGCGCAACGTCCGCCACCCCTCCAAGATCGTGTCCATCGGGGAGACCATCGAGGCGGTGGTCCTCAAGGTGGATGAAACCGAAGAGAAGATCTCCCTCGGCATGAAGCAGACCGAGGAGGATCCCTGGATGGCGCTCCCGCAGAAGTATCCCGTCGGCACCCGCATCCGCGGCAAGGTGCGCAACCTCACGTCGTTCGGCGCGTTCGTGGAGATCGAGCCCGGCATCGACGGCCTGATCCACATCTCCGACATGTCGTGGACCAAACGGGTGCAGCACCCCTCCGAGGTCGTGAAGAAGGGCGACGAGGTGGAGGTCCTGATCCTGAACGTGGACGCCGAGAACAAGCGGATCTCGCTCGGCTTGAAGCAGGCGCAGGAGGACCCCTGGCTCAGGATCGGTGAGACGTACCCGGTCGGCACCGAGCTGCGGGGTCGTGTGCTGCGCCTCATGGACAAGGGCGTCGTGGTGGATCTGGGGAACGACATCGAGGGCTTCGTCCCGATGTCGCAGCTCGGCATTCCGGATTTGCAGAACCCGGCCGATGCGGTGAAAGAAGGCCAGGCCGCGGAGCTGAAGGTGCTGGAAGTGGACCCCATCCATCATCGGATCGTGCTGGCAGCGACCGGCTGGCCCAAAGACGACGGGGTTCAGGAAGCAGCGAAACAGGACGGCCAAAAACTAGACGCGTAG
PROTEIN sequence
Length: 575
MLVDTQDLPESKAEGPAAPTAHSHLRVRPDLHEEYSPDEIAKMTEMYEGTLSNIEEGEIVKSKVLRVTDTAVILDVGFKSEGAVPIDEFKDAHSLKEGDEVEVFLEHLEDQEGAVVLSKKKADFMRVWERIREAHEKDEAVSGTLVKKIKGGVVVDLMGVDAFLPGSQIALRRVPNIDELLGQSFEFKIIKLNKRRRNIVVSRRVLLEAERKTKRDVLMKELQVGQVRKGIVKNITDFGAFIDLGGVDGLLHITDMSYGRVSHPSELVHIGQEVEVKVLDIDWERERISLGLKQLQPYPWKDVAAKYPVGTRVQGKVVSITNYGAFVELEPGIEGLVHISEMSWTRNVRHPSKIVSIGETIEAVVLKVDETEEKISLGMKQTEEDPWMALPQKYPVGTRIRGKVRNLTSFGAFVEIEPGIDGLIHISDMSWTKRVQHPSEVVKKGDEVEVLILNVDAENKRISLGLKQAQEDPWLRIGETYPVGTELRGRVLRLMDKGVVVDLGNDIEGFVPMSQLGIPDLQNPADAVKEGQAAELKVLEVDPIHHRIVLAATGWPKDDGVQEAAKQDGQKLDA*