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13_1_20cm_4_scaffold_448

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_448_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(10..618)
DNA (609bp) protein (203aa)
Elongation factor Ts n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C5W9_THEGP
translation elongation factor Ts; K02357 elongation factor Ts Tax=RBG_16_Gemmatimonadetes_66_8_curated
Elongation factor Ts
13_1_20cm_4_scaffold_448_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(710..1588)
DNA (879bp) protein (293aa)
30S ribosomal protein S2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z3_GEMAT
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ribosomal protein S2
13_1_20cm_4_scaffold_448_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(1750..2157)
DNA (408bp) protein (136aa)
30S ribosomal protein S9 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS9_GEMAT
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpsI; 30S ribosomal protein S9
13_1_20cm_4_scaffold_448_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(2154..2603)
DNA (450bp) protein (150aa)
50S ribosomal protein L13 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL13_GEMAT
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rplM; 50S ribosomal protein L13
13_1_20cm_4_scaffold_448_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2671..3201)
DNA (531bp) protein (177aa)
Biotin carboxyl carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z7_GEMAT
biotin carboxyl carrier protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
biotin carboxyl carrier protein
13_1_20cm_4_scaffold_448_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3293..4534)
DNA (1242bp) protein (414aa)
hypothetical protein; K00599 [EC:2.1.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z8_GEMAT
(Uracil-5)-methyltransferase
13_1_20cm_4_scaffold_448_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4531..6048)
DNA (1518bp) protein (506aa)
acyl-CoA carboxylase alpha chain (EC:6.4.1.-) Tax=RBG_16_Gemmatimonadetes_66_8_curated
acyl-CoA carboxylase alpha chain (EC:6.4.1.-)
Acyl-CoA carboxylase alpha chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z9_GEMAT
13_1_20cm_4_scaffold_448_8
unknown

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comp(6122..7114)
DNA (993bp) protein (331aa)

This feature has no annotations

13_1_20cm_4_scaffold_448_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7095..8636)
DNA (1542bp) protein (514aa)
acyl-CoA carboxylase beta chain (EC:6.4.1.-); K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Acyl-CoA carboxylase beta chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A400_GEMAT
carboxyl transferase
13_1_20cm_4_scaffold_448_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(8769..10493)
DNA (1725bp) protein (575aa)
30S ribosomal protein S1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A406_GEMAT
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA binding S1 domain protein
13_1_20cm_4_scaffold_448_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10567..11268)
DNA (702bp) protein (234aa)
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein n=1 Tax=Coriobacteriaceae RepID=UPI00034CD68A
Cytidylate kinase
13_1_20cm_4_scaffold_448_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11265..12539)
DNA (1275bp) protein (425aa)
aroA/cmk; 3-phosphoshikimate 1-carboxyvinyltransferase/cytidylate kinase (EC:2.5.1.19 2.7.4.14); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonade
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Thermus islandicus RepID=UPI0003B62AD8
3-phosphoshikimate 1-carboxyvinyltransferase
13_1_20cm_4_scaffold_448_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12536..13099)
DNA (564bp) protein (188aa)
prephenate dehydrogenase; K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Prephenate dehydrogenase id=4941219 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
prephenate dehydrogenase
Displaying 13 items

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