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13_1_20cm_4_scaffold_1138

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1138_1
unknown

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2..193
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_20cm_4_scaffold_1138_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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205..1284
DNA (1080bp) protein (360aa)
ugpC; glycerol-3-phosphate transporter ATP-binding subunit (EC:3.6.3.-)
ATPase component of ABC-type sugar transporter n=2 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9NMP2_RHILT
ATPase component of ABC-type sugar transporter {ECO:0000313|EMBL:EJB08112.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gr
13_1_20cm_4_scaffold_1138_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1281..3155
DNA (1875bp) protein (625aa)
binding-protein-dependent transporters inner membrane component; K02025 multiple sugar transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Permease component of ABC-type sugar transporter id=4522138 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
binding-protein-dependent transport systems inner membrane component
13_1_20cm_4_scaffold_1138_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3148..3951
DNA (804bp) protein (268aa)
binding-protein-dependent transporters inner membrane component; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC-type sugar transport system, permease component id=4214566 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
sugar ABC transporter permease
13_1_20cm_4_scaffold_1138_5
unknown

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4083..4679
DNA (597bp) protein (199aa)

This feature has no annotations

13_1_20cm_4_scaffold_1138_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4692..6251
DNA (1560bp) protein (520aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A980_GEMAT
two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PAS sensor protein
13_1_20cm_4_scaffold_1138_7
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6248..6427
DNA (180bp) protein (60aa)
Two-component response regulator, CopR {ECO:0000313|EMBL:AGI24969.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps
13_1_20cm_4_scaffold_1138_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6415..6861
DNA (447bp) protein (149aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A978_GEMAT
OmpR family two-component response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=GWC2_Gemmatimonadetes_71_10_curated
transcriptional regulator domain-containing protein
13_1_20cm_4_scaffold_1138_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6863..8320
DNA (1458bp) protein (486aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A977_GEMAT
two-component histidine kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
ATP-binding region ATPase domain protein
13_1_20cm_4_scaffold_1138_10
unknown

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8418..8900
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_20cm_4_scaffold_1138_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8905..9528
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABH1_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH39848.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_4_scaffold_1138_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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9648..10325
DNA (678bp) protein (226aa)
Putative TonB protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A976_GEMAT
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated
tonB; putative TonB protein
13_1_20cm_4_scaffold_1138_13
unknown

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comp(10350..11063)
DNA (714bp) protein (238aa)

This feature has no annotations

13_1_20cm_4_scaffold_1138_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11068..11442
DNA (375bp) protein (125aa)
putative biopolymer transport protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Biopolymer transport protein ExbD/TolR
13_1_20cm_4_scaffold_1138_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11446..11880
DNA (435bp) protein (145aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A973_GEMAT
putative biopolymer transport protein; K03559 biopolymer transport protein ExbD Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative biopolymer transport protein
13_1_20cm_4_scaffold_1138_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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11957..12715
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A972_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG91151.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_4_scaffold_1138_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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12748..14265
DNA (1518bp) protein (506aa)
Putative permease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A971_GEMAT
putative permease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
putative permease
13_1_20cm_4_scaffold_1138_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(14262..15218)
DNA (957bp) protein (319aa)
Putative N-acetylglucosamine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A969_GEMAT
ATPase BadF/BadG/BcrA/BcrD type {ECO:0000313|EMBL:AHG91146.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ATPase BadF/BadG/BcrA/BcrD type
13_1_20cm_4_scaffold_1138_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15215..16690)
DNA (1476bp) protein (492aa)
Putative sodium/solute symporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A968_GEMAT
putative sodium/solute symporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
SSS sodium solute transporter superfamily
13_1_20cm_4_scaffold_1138_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(16777..17130)
DNA (354bp) protein (118aa)
Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A966_GEMAT
erpA; putative iron-sulfur cluster insertion protein ErpA Tax=RBG_16_Gemmatimonadetes_66_8_curated
iron-sulfur cluster assembly accessory protein
13_1_20cm_4_scaffold_1138_21
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

17233..18987
DNA (1755bp) protein (585aa)
Na+/solute symporter n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN77_KORVE rbh
Na+/solute symporter Tax=RBG_16_Ignavibacteria_35_7_curated
Na+/solute symporter
13_1_20cm_4_scaffold_1138_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(18971..20155)
DNA (1185bp) protein (395aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
beta-N-acetylhexosaminidase., beta-lactamase (EC:3.5.2.6 3.2.1.52)
Beta-N-acetylhexosaminidase., Beta-lactamase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJI0_RHOMR
Displaying 22 items

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