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13_1_20cm_4_scaffold_192

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_192_1
unknown

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3..221
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_20cm_4_scaffold_192_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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592..834
DNA (243bp) protein (81aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DGR3_SINAD
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:AGA27998.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" s
DNA-binding domain-containing protein
13_1_20cm_4_scaffold_192_3
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria

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910..1383
DNA (474bp) protein (158aa)
Heat shock protein Hsp20 n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YTE4_9THEM
heat shock protein Hsp20; K13993 HSP20 family protein Tax=GWF2_Planctomycetes_40_8_curated
heat-shock protein Hsp20
13_1_20cm_4_scaffold_192_4
bacterium UASB270, Bacteria

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1383..3815
DNA (2433bp) protein (811aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] id=14428721 bin=bin3_NC10 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin3_NC10 organism_group=NC10
ATP-dependent protease La (EC:3.4.21.53)
13_1_20cm_4_scaffold_192_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3812..4207
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X8_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Verrucomicrobia/Planctomycetes-restricted protein
13_1_20cm_4_scaffold_192_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4207..5040
DNA (834bp) protein (278aa)
MEMO1 family protein Anae109_1268 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H9T0_ANADF
hypothetical protein; K06990 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_192_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5037..6560
DNA (1524bp) protein (508aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UEM1_ANASK
carbohydrate kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NAD(P)H-hydrate epimerase
13_1_20cm_4_scaffold_192_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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6569..7534
DNA (966bp) protein (322aa)
Thiamine-monophosphate kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Y1_GEMAT
Thiamine-monophosphate kinase {ECO:0000313|EMBL:AHG90546.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
thiamine-monophosphate kinase
13_1_20cm_4_scaffold_192_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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7531..8250
DNA (720bp) protein (240aa)
acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] Tax=RBG_16_Gemmatimonadetes_66_8_curated
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LIN1_SYNFM
1-acyl-sn-glycerol-3-phosphate acyltransferase
13_1_20cm_4_scaffold_192_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8264..9544
DNA (1281bp) protein (427aa)
eno; enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Enolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ENO_GEMAT
Enolase
13_1_20cm_4_scaffold_192_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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9541..9816
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7Y4_GEMAT
Septum formation initiator Tax=GWC2_Gemmatimonadetes_71_10_curated
Septum formation initiator
13_1_20cm_4_scaffold_192_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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9827..11026
DNA (1200bp) protein (400aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_4_scaffold_192_13

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10980..13079
DNA (2100bp) protein (700aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00035D9045
Putative laccase {ECO:0000313|EMBL:ADH16187.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
multicopper oxidase type 3
13_1_20cm_4_scaffold_192_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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13092..14492
DNA (1401bp) protein (467aa)
Amidohydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q21_SOLUE
Amidohydrolase {ECO:0000313|EMBL:ABJ88249.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibact
amidohydrolase
13_1_20cm_4_scaffold_192_trna_1
unknown

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14524..14598
DNA (75bp)
transferRNA
13_1_20cm_4_scaffold_192_15
RLO_PLX_64_10, Bacteria

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comp(14668..15123)
DNA (456bp) protein (152aa)
ketosteroid isomerase-like protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
ketosteroid isomerase-like protein id=24506738 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
13_1_20cm_4_scaffold_192_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(15127..15711)
DNA (585bp) protein (195aa)
flavin reductase-like domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein id=14424636 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
13_1_20cm_4_scaffold_192_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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15724..17097
DNA (1374bp) protein (458aa)
cell cycle protein; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
tRNA(Ile)-lysidine synthase id=3443813 bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
cell cycle protein
13_1_20cm_4_scaffold_192_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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17054..17608
DNA (555bp) protein (185aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:BAH38434.1}; EC=2.4.2.8 {ECO:0000313|EMBL:BAH38434.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae;
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A874_GEMAT
13_1_20cm_4_scaffold_192_19
unknown

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17609..17746
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 20 items

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