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13_1_20cm_4_scaffold_247

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_247_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2..367
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=2 Tax=Thermaerobacter RepID=E6SKX5_THEM7
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Ribosomal protein S13
13_1_20cm_4_scaffold_247_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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374..844
DNA (471bp) protein (157aa)
30S ribosomal protein S11 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J2_GEMAT
rpsK; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RBG_16_Gemmatimonadetes_66_8_curated
rpsK; 30S ribosomal protein S11
13_1_20cm_4_scaffold_247_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


846..1481
DNA (636bp) protein (212aa)
30S ribosomal protein S4 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J1_GEMAT
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_16_Gemmatimonadetes_66_8_curated
ribosomal protein S4
13_1_20cm_4_scaffold_247_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1561..2421
DNA (861bp) protein (287aa)
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-directed RNA polymerase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J0_GEMAT
DNA-directed RNA polymerase subunit alpha
13_1_20cm_4_scaffold_247_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2421..2777
DNA (357bp) protein (119aa)
50S ribosomal protein L17 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL17_GEMAT
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RBG_16_Gemmatimonadetes_66_8_curated
50S ribosomal protein L17
13_1_20cm_4_scaffold_247_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3053..4081
DNA (1029bp) protein (343aa)
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=RBG_16_Gemmatimonadetes_66_8_curated
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I7_GEMAT
13_1_20cm_4_scaffold_247_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4078..5010
DNA (933bp) protein (311aa)
rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase (EC:1.1.1.281)
GDP-4-dehydro-6-deoxy-D-mannose reductase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08T32_STIAD
putative GDP-6-deoxy-D-lyxo-4-hexulose reductase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_4_scaffold_247_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4994..8266
DNA (3273bp) protein (1091aa)
carB; carbamoyl-phosphate synthase large chain (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Carbamoyl-phosphate synthase large chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=CARB_GEMAT rbh
Carbamoyl-phosphate synthase large subunit glutamine-dependent
13_1_20cm_4_scaffold_247_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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8437..9198
DNA (762bp) protein (254aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.3.1.98)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Brevibacillus laterosporus RepID=UPI00037C5CBD
13_1_20cm_4_scaffold_247_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9637..10752
DNA (1116bp) protein (372aa)
Aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I2_GEMAT
aminotransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DegT/DnrJ/EryC1/StrS aminotransferase
13_1_20cm_4_scaffold_247_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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10749..11753
DNA (1005bp) protein (335aa)
Oxidoreductase domain protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NXC2_GRAMM id=5225809 bin=16ft_combo_ws3_JS1 species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade rbh
oxidoreductase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative dehydrogenase
13_1_20cm_4_scaffold_247_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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11750..13072
DNA (1323bp) protein (441aa)
UDP-N-acetyl-D-mannosaminuronate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W5_GEMAT
nucleotide-sugar dehydrogenase Tax=GWC2_Gemmatimonadetes_71_10_curated
nucleotide-sugar dehydrogenase
13_1_20cm_4_scaffold_247_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13069..14385
DNA (1317bp) protein (439aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
gur:Gura_2308 UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] id=48634 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown
nucleotide sugar dehydrogenase
13_1_20cm_4_scaffold_247_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14370..15323
DNA (954bp) protein (318aa)
NAD-dependent epimerase/dehydratase family protein; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=GWC2_Gemmatimonadetes_71_10_curated
NAD-dependent epimerase/dehydratase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UZ82_ROSS1
NAD-dependent epimerase/dehydratase
13_1_20cm_4_scaffold_247_15
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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15320..16306
DNA (987bp) protein (329aa)
NAD-dependent epimerase/dehydratase Tax=GWC2_Deltaproteobacteria_65_14_curated
NAD-dependent epimerase/dehydratase id=4503064 bin=GWC2_Proteo_65_14_Ab886 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria rbh
UDP-glucuronate 5'-epimerase
13_1_20cm_4_scaffold_247_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16269..17060
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZB41_9BACT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_247_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17057..17953
DNA (897bp) protein (299aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_247_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17950..18744
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4I0_GEMAT
hypothetical protein; K05807 putative lipoprotein Tax=GWC2_Gemmatimonadetes_71_10_curated
outer membrane assembly lipoprotein YfiO
13_1_20cm_4_scaffold_247_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18765..19322
DNA (558bp) protein (186aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RBG_16_Gemmatimonadetes_66_8_curated
nicotinate-nucleotide adenylyltransferase n=1 Tax=Thermus islandicus RepID=UPI0003B730A4
nicotinate-nucleotide adenylyltransferase
13_1_20cm_4_scaffold_247_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19330..22626
DNA (3297bp) protein (1099aa)
Protein translocase subunit SecA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4H8_GEMAT rbh
secA; preprotein translocase SecA subunit; K03070 preprotein translocase subunit SecA Tax=RBG_16_Gemmatimonadetes_66_8_curated
secA; preprotein translocase SecA subunit
13_1_20cm_4_scaffold_247_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(22699..23955)
DNA (1257bp) protein (419aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QPI2_SPILD
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AHG89265.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
phosphoesterase PA-phosphatase related protein
13_1_20cm_4_scaffold_247_22
unknown

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comp(24458..25006)
DNA (549bp) protein (183aa)

This feature has no annotations

Displaying 22 items

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