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13_1_20cm_4_scaffold_307

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_307_trna_2
unknown

Not on your lists

comp(11..97)
DNA (87bp)
transferRNA
13_1_20cm_4_scaffold_307_trna_1
unknown

Not on your lists

comp(105..191)
DNA (87bp)
transferRNA
13_1_20cm_4_scaffold_307_1
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(222..1745)
DNA (1524bp) protein (508aa)
Benzoate-CoA ligase family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LVL9_HALO1
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EYF05781.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source
benzoate-CoA ligase family
13_1_20cm_4_scaffold_307_2
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1760..2509
DNA (750bp) protein (250aa)
Creatininase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LVM0_HALO1
Creatininase {ECO:0000313|EMBL:ACY17581.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum
creatininase
13_1_20cm_4_scaffold_307_3
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2496..3260
DNA (765bp) protein (255aa)
Oxidoreductase n=2 Tax=Ralstonia solanacearum RepID=V5AJJ3_RALSL
Probable oxidoreductase protein {ECO:0000313|EMBL:CAD17184.1}; TaxID=267608 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sol
RSp0033; oxidoreductase
13_1_20cm_4_scaffold_307_4
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3268..3648
DNA (381bp) protein (127aa)
Bona fide RidA/YjgF/TdcF/RutC subgroup {ECO:0000313|EMBL:AKF07328.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;"
Endoribonuclease L-PSP id=3925212 bin=GWC2_Syntrophobacterales_56_13 species=unknown genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
endoribonuclease L-PSP
13_1_20cm_4_scaffold_307_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3645..4433
DNA (789bp) protein (263aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FQH6_SORC5
Enoyl-CoA hydratase {ECO:0000313|EMBL:EYF00334.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces
13_1_20cm_4_scaffold_307_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4433..5569
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI000379B90F
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KGF82116.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
acyl-CoA dehydrogenase-like protein
13_1_20cm_4_scaffold_307_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5566..7815
DNA (2250bp) protein (750aa)
oxidoreductase (EC:1.-.-.-); K09461 anthraniloyl-CoA monooxygenase [EC:1.14.13.40] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
oxidoreductase (EC:1.-.-.-)
Oxidoreductase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AAA3_9PROT
13_1_20cm_4_scaffold_307_8
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7812..9602
DNA (1791bp) protein (597aa)
Kynureninase {ECO:0000313|EMBL:KJS02541.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
Kynureninase id=1734527 bin=GWB2_Desulfobacterales_56_26 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
kynureninase
13_1_20cm_4_scaffold_307_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9553..10014)
DNA (462bp) protein (154aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacter
Putative cytosine deaminase n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VSW0_ARTAR
CMP/dCMP deaminase zinc-binding protein
13_1_20cm_4_scaffold_307_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10007..12622)
DNA (2616bp) protein (872aa)
Chaperone ClpB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8H4_GEMAT
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ATP-dependent chaperone ClpB
13_1_20cm_4_scaffold_307_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12750..13193)
DNA (444bp) protein (148aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
ial:IALB_2784 Putative carboxypeptidase id=719741 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
13_1_20cm_4_scaffold_307_12
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13305..15176)
DNA (1872bp) protein (624aa)
selenocysteine-specific protein translation elongation factor; K03833 selenocysteine-specific elongation factor Tax=CG_Syntroph_01
Selenocysteine-specific protein translation Elongation Factor id=4561235 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
selB; selenocysteine-specific translation elongation factor
13_1_20cm_4_scaffold_307_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15155..15934)
DNA (780bp) protein (260aa)
DNA repair protein RecO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8H2_GEMAT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;"
DNA repair protein recO
13_1_20cm_4_scaffold_307_14
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(15931..16731)
DNA (801bp) protein (267aa)
Periplasmic binding protein n=2 Tax=Chloroflexus RepID=A9WHK1_CHLAA
Periplasmic binding protein {ECO:0000313|EMBL:ABY36327.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chlorofl
periplasmic binding protein
13_1_20cm_4_scaffold_307_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16761..18728)
DNA (1968bp) protein (656aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABF9_GEMAT rbh
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_4_scaffold_307_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18765..20657)
DNA (1893bp) protein (631aa)
Putative TonB-dependent outer membrane receptor for cobalamin and Fe transport n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHA1_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:AHG90671.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
TonB-dependent receptor
13_1_20cm_4_scaffold_307_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20654..21445)
DNA (792bp) protein (264aa)
btuC; putative vitamin B12 transport protein BtuD; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative vitamin B12 transport protein BtuD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5M7_GEMAT
btuC; putative vitamin B12 transport protein BtuD
13_1_20cm_4_scaffold_307_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21489..22430)
DNA (942bp) protein (314aa)
hemin ABC transporter permease n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AD06
transmembrane ABC transporter protein,permease; K02015 iron complex transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
iron ABC transporter
13_1_20cm_4_scaffold_307_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22427..23239)
DNA (813bp) protein (271aa)
ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G9_GEMAT
ABC transporter substrate-binding protein; K02016 iron complex transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ABC-type transporter, periplasmic subunit
13_1_20cm_4_scaffold_307_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(23431..24174)
DNA (744bp) protein (248aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_4_scaffold_307_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(24248..24754)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G7_GEMAT
hypothetical protein; K08999 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
protein of unknown function DUF151
Displaying 23 items

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