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13_1_20cm_4_scaffold_317

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_317_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3..1352)
DNA (1350bp) protein (450aa)
Carbon starvation protein CstA n=2 Tax=Geobacillus RepID=D7D334_GEOSC
cstA; carbon starvation protein A; K06200 carbon starvation protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
carbon starvation protein CstA
13_1_20cm_4_scaffold_317_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1541..2275
DNA (735bp) protein (245aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] id=1250464 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
short-chain dehydrogenase/reductase SDR
13_1_20cm_4_scaffold_317_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2285..2944
DNA (660bp) protein (220aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_317_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2893..3966
DNA (1074bp) protein (358aa)
icd; isocitrate dehydrogenase (EC:1.1.1.42); K00030 isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
icd1; isocitrate dehydrogenase (EC:1.1.1.41)
Isocitrate dehydrogenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G817_SORC5
13_1_20cm_4_scaffold_317_5
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4228..5622
DNA (1395bp) protein (465aa)
hypothetical protein Tax=GWC2_Pelobacteraceae_58_13_curated
Uncharacterized protein id=4498226 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_1_20cm_4_scaffold_317_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5619..6482
DNA (864bp) protein (288aa)
Metallophosphoesterase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZR5_RUBXD
metallophosphoesterase Tax=RBG_16_Gemmatimonadetes_66_8_curated
metallophosphoesterase
13_1_20cm_4_scaffold_317_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6536..7723
DNA (1188bp) protein (396aa)
gcdH; glutaryl-CoA dehydrogenase (EC:1.3.99.7); K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glutaryl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA7_GEMAT
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_4_scaffold_317_8
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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7758..9527
DNA (1770bp) protein (590aa)
hypothetical protein Tax=GWA2_Ignavibacteriae_55_25_curated
Putative uncharacterized protein id=4924174 bin=GWA2_Ignavibacteria_55_11 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
13_1_20cm_4_scaffold_317_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

9545..9811
DNA (267bp) protein (89aa)
Electron transfer flavoprotein beta-subunit n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWQ9_SYNAS
etfB; electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
electron transfer flavoprotein beta-subunit
13_1_20cm_4_scaffold_317_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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9804..10163
DNA (360bp) protein (120aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKP2_IGNAJ id=5223689 bin=16ft_combo_ws3_JS1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
etfB; electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Electron transfer flavoprotein alpha/beta-subunit
13_1_20cm_4_scaffold_317_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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10160..11119
DNA (960bp) protein (320aa)
Electron transfer flavoprotein, alpha subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LD69_CHLTF id=5223690 bin=16ft_combo_ws3_JS1 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
etfA; electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit Tax=GWC2_Gemmatimonadetes_71_10_curated
Electron transfer flavoprotein alpha/beta-subunit
13_1_20cm_4_scaffold_317_12
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

11112..12731
DNA (1620bp) protein (540aa)
electron-transferring-flavoprotein dehydrogenase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
electron-transferring-flavoprotein dehydrogenase; K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] id=1250187 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
electron transfer flavoprotein-ubiquinone oxidoreductase
13_1_20cm_4_scaffold_317_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12735..13517)
DNA (783bp) protein (261aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
Histidine kinase n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B5Q2_9BURK
sensor histidine kinase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
13_1_20cm_4_scaffold_317_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13514..14308)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003697360
sensor histidine kinase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
putative two-component sensor histidine kinase protein
13_1_20cm_4_scaffold_317_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14448..15074)
DNA (627bp) protein (209aa)
Multiple antibiotic resistance MarC-related protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU42_KORVE
UPF0056 inner membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
multiple antibiotic resistance MarC-like protein
13_1_20cm_4_scaffold_317_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15071..16834)
DNA (1764bp) protein (588aa)
Putative protease with the C-terminal PDZ domain n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ47_CHLTF
Predicted protease with the C-terminal PDZ domain {ECO:0000313|EMBL:CDM66894.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylal
putative protease with the C-terminal PDZ domain
13_1_20cm_4_scaffold_317_17
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16836..17669)
DNA (834bp) protein (278aa)
Diguanylate cyclase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEU7_GEOUR
diguanylate cyclase Tax=RBG_13_Deltaproteobacteria_61_14_curated
diguanylate cyclase
13_1_20cm_4_scaffold_317_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17669..18892)
DNA (1224bp) protein (408aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=GWC2_Gemmatimonadetes_71_10_curated
MoeA domain protein domain I and II
Molybdopterin molybdochelatase id=4324808 bin=GWF2_Syntrophobacterales_56_9 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
13_1_20cm_4_scaffold_317_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18889..19422)
DNA (534bp) protein (178aa)
Molybdopterin-guanine dinucleotide biosynthesis protein B MobB n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G3H8_9DELT
Molybdopterin-guanine dinucleotide biosynthesis protein B Tax=GWC2_Gemmatimonadetes_71_10_curated
molybdopterin-guanine dinucleotide biosynthesis protein B
13_1_20cm_4_scaffold_317_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19404..20012)
DNA (609bp) protein (203aa)
molybdopterin-guanine dinucleotide biosynthesis protein A; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77] Tax=RBG_16_Gemmatimonadetes_66_8_curated
mobA family protein; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77] id=14631117 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
Molybdopterin-guanine dinucleotide biosynthesis protein A
13_1_20cm_4_scaffold_317_21
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20026..20448)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003713DB1
Uncharacterized protein {ECO:0000313|EMBL:KIN90847.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
CoA-binding protein
13_1_20cm_4_scaffold_317_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20445..21167)
DNA (723bp) protein (241aa)
formate dehydrogenase family accessory protein (FdhD) Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative formate dehydrogenase family accessory protein (FdhD) id=3910770 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
formate dehydrogenase family accessory protein FdhD
13_1_20cm_4_scaffold_317_23
Chlorobaculum tepidum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(21190..21570)
DNA (381bp) protein (127aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=194439 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiace
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=Q8KEA7_CHLTE
6-pyruvoyl tetrahydrobiopterin synthase
13_1_20cm_4_scaffold_317_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21574..22584)
DNA (1011bp) protein (337aa)
ABC transporter; K06857 tungstate transport system ATP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC transporter ATP-binding protein; K06857 tungstate transport system ATP-binding protein id=14430717 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ABC transporter-like protein
13_1_20cm_4_scaffold_317_25
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(22577..23272)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000381E338
ABC transporter permease; K05773 tungstate transport system permease protein Tax=RBG_13_Actinobacteria_35_12_curated
binding-protein-dependent transport systems inner membrane component
13_1_20cm_4_scaffold_317_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23260..23985)
DNA (726bp) protein (242aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_317_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23985..24605)
DNA (621bp) protein (207aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9E8_ACIC5
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
13_1_20cm_4_scaffold_317_28
unknown

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24959..25432
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_20cm_4_scaffold_317_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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25386..26483
DNA (1098bp) protein (366aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_4_scaffold_317_30
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

26480..26821
DNA (342bp) protein (114aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=GWC2_Gemmatimonadetes_71_10_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB89_GEMAT
hypothetical protein
Displaying items 1-30 of 53 in total

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