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13_1_20cm_4_scaffold_62

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_62_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

37..894
DNA (858bp) protein (286aa)
Cell division protein FtsX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M6_GEMAT
ftsX; cell division protein FtsX; K09811 cell division transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ftsX; cell division protein FtsX
13_1_20cm_4_scaffold_62_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

891..2126
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M7_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_62_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2137..3471)
DNA (1335bp) protein (445aa)
Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L7_GEMAT
putative two-component response regulator; K02488 two-component system, cell cycle response regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
putative two-component response regulator
13_1_20cm_4_scaffold_62_4
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3647..4282
DNA (636bp) protein (212aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RBG_16_Desulfobacca_60_12_curated
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Methanoregula boonei (strain 6A8) RepID=PIMT_METB6
13_1_20cm_4_scaffold_62_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4279..5145
DNA (867bp) protein (289aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
Probable endonuclease 4 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M8_GEMAT
endonuclease 4
13_1_20cm_4_scaffold_62_6
unknown

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5154..5477
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_20cm_4_scaffold_62_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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5546..6796
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT06_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_4_scaffold_62_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

6798..7844
DNA (1047bp) protein (349aa)
ABC-type metal ion transporter, periplasmic subunit n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT05_9BACT
troA; periplasmic zinc binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
troA; periplasmic zinc binding protein
13_1_20cm_4_scaffold_62_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7841..8701
DNA (861bp) protein (287aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XT04_9BACT
ABC-3 protein; K02075 zinc/manganese transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ABC-3 protein
13_1_20cm_4_scaffold_62_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8678..10363)
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEM3_GEMAT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_62_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(10473..12827)
DNA (2355bp) protein (785aa)
Cna protein B-type domain protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9J4_ACIC5
Outer membrane receptor protein {ECO:0000313|EMBL:CDM64114.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Cna protein B-type domain-containing protein
13_1_20cm_4_scaffold_62_12
unknown

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comp(12934..13332)
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_20cm_4_scaffold_62_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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13362..15638
DNA (2277bp) protein (759aa)
malic enzyme (EC:1.1.1.40); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XW7_SOLUE
phosphate acetyl/butaryl transferase
13_1_20cm_4_scaffold_62_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15642..17165
DNA (1524bp) protein (508aa)
pckA; phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9N1_GEMAT
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
13_1_20cm_4_scaffold_62_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17140..18357
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9N5_GEMAT
hypothetical protein; K06885 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
metal-dependent phosphohydrolase HD sub domain-containing protein
13_1_20cm_4_scaffold_62_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18360..19076)
DNA (717bp) protein (239aa)
putative serine/threonine protein phosphatase (EC:3.1.3.16); K01090 protein phosphatase [EC:3.1.3.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative serine/threonine protein phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9N8_GEMAT
protein phosphatase 2C domain protein
13_1_20cm_4_scaffold_62_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(19153..20604)
DNA (1452bp) protein (484aa)
ABC transporter, ATP-binding, FHA domain protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0BZY2_ACAM1
FHA domain-containing protein; K02283 pilus assembly protein CpaF Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC transporter ATP-binding protein
13_1_20cm_4_scaffold_62_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(20679..21761)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y147_SORCE
hypothetical protein; K07027 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_4_scaffold_62_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

21793..24585
DNA (2793bp) protein (931aa)
UvrABC system protein A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9P0_GEMAT
uvrA; UvrABC system protein A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
excinuclease ABC, A subunit
13_1_20cm_4_scaffold_62_20
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

24582..25454
DNA (873bp) protein (291aa)
hypothetical protein Tax=RIFOXYC12_FULL_TA06_54_24_curated
hypothetical protein id=7202063 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
drug/metabolite transporter (DMT) superfamily permease
13_1_20cm_4_scaffold_62_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

25528..27450
DNA (1923bp) protein (641aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM85_KORVE
PAS/PAC sensor hybrid histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
multi-sensor hybrid histidine kinase
13_1_20cm_4_scaffold_62_22
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

27578..28531
DNA (954bp) protein (318aa)
TonB-dependent receptor plug n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIB6_9BACT
TonB-dependent receptor, plug Tax=GWC2_Ignavibacteria_rel_36_12_curated
TonB-dependent receptor, plug
13_1_20cm_4_scaffold_62_23

Not on your lists

28482..29342
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI0003674085
TonB dependent receptor {ECO:0000313|EMBL:AIA11043.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
TonB-dependent receptor, plug
13_1_20cm_4_scaffold_62_24

Not on your lists

29330..29866
DNA (537bp) protein (179aa)
Putative transmembrane protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYC2_OPITP
Uncharacterized protein {ECO:0000313|EMBL:AIA11042.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transmembrane protein
13_1_20cm_4_scaffold_62_25
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29869..31344
DNA (1476bp) protein (492aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;
Phytochrome, two-component sensor histidine kinase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JWC4_9BACT
integral membrane sensor signal transduction histidine kinase
13_1_20cm_4_scaffold_62_26
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31357..31800
DNA (444bp) protein (148aa)
Response regulator receiver domain protein (CheY) n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJL2_THIDA
Response regulator receiver domain protein (CheY) {ECO:0000313|EMBL:AAZ97145.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus
response regulator receiver domain-containing protein
13_1_20cm_4_scaffold_62_27
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

31806..33920
DNA (2115bp) protein (705aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBD7_9BACT
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
multi-sensor hybrid histidine kinase
Displaying 27 items

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