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13_1_20cm_4_scaffold_577_4

Organism: 13_1_20CM_4_Gemmatimonadetes_66_11

near complete RP 42 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: 3315..4523

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA12_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 402.0
  • Bit_score: 542
  • Evalue 2.80e-151
pilC; type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=RBG_16_Gemmatimonadetes_66_8_curated UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 385.0
  • Bit_score: 603
  • Evalue 1.90e-169
Type II secretion system F domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 402.0
  • Bit_score: 551
  • Evalue 2.20e-154

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1209
ATGCCGGTCTTTGAATACACCGCGCGCAACCTGAAGGGCGATCTCGTTCGCGACAAGATCGATCTCGCGTCGCGCGACGACGTCATCGCCCATCTGCGCAAGAACCGCATGGTCGTCGTGCAGATCCGCGAGGCCAAGGGAGGAGGCGTCAACCTCGCGGCCTTCTTCAAGGCGGGCGTGAAGACGCGCGACGTCGTGATCTTCACGCGCCAGTTCTCCACCATGATCAACTCCGGACTGCCGCTGGTGCAGGCGCTCGACATCCTGTCGCAGCAGACCGAGAACAAGGTGCTGGCCGATATCACCCGCGCGGTCGTGTACGACGTGGAAAGCGGCCACACCCTCGCCGATGCGCTGCGCAAGCACCCCAAAGCGTTCAGCGATCTGTACGTGAACATGGTGGCGGCCGGTGAGGCGGGCGGTATTCTCGACACCATCCTGCTGCGCCTGGCGACGTTCCTGGAGAAGAATGACTCCATCATCCGCAAGGTGAAGGGCGCGATGATCTACCCGGCCGTGATCTTCTCGGTCGCCGGGATCGCCGTGGCCGTGCTGCTCATCTTCGTGATTCCGACGTTCCAGAGCATGTTCGCGTCGGTGAACCTCGCGCTGCCGCTGCCGACGCGCATCGTGATCGGCGCGAGCAACGTCCTCAAGAACTTCTGGTGGGCGATCATCGGCGTCGGCGTCTTCGCTGTCGTGGCCCTGAATCGCTACAACAAGACGACGGCCGGGAAGCTGCAGATCGACAAGCTGCTGCTCAGCCTCCCGGTGCTCGGCGACCTGCTGCGCAAGTCTGCGGTGTCGCGCTTTACCCGCACCCTCGGCACGCTGATCTCGTCGGGTGTGTCGATTCTCGACGGCCTCGAAATCACCGCCCGCACCGCCGGCAACATGGTCATCCACAACGCCGTGATGGAATCGCGCGCCTCGATTGCGGGCGGTGAGACGATCGCGGCGCCGCTGCAGAAGTCGAAAGTCTTTCCGCCGATGGTGATTTCGATGATCGCCGTCGGGGAACAGACGGGTGGGTTGGACGAGATGCTCACCAAAATCGCCGACTTCTACGACGACGAGGTCGACGCCGCCGTCAGCGCGCTCCTCTCGCTGCTCGAGCCGATCATGATCGTGGTGCTGGGTGTGATCGTCGGCGGCATGGTCGTGGCGATGTACCTGCCGATCTTCGATATGGTGAACGCGGTCCAATAA
PROTEIN sequence
Length: 403
MPVFEYTARNLKGDLVRDKIDLASRDDVIAHLRKNRMVVVQIREAKGGGVNLAAFFKAGVKTRDVVIFTRQFSTMINSGLPLVQALDILSQQTENKVLADITRAVVYDVESGHTLADALRKHPKAFSDLYVNMVAAGEAGGILDTILLRLATFLEKNDSIIRKVKGAMIYPAVIFSVAGIAVAVLLIFVIPTFQSMFASVNLALPLPTRIVIGASNVLKNFWWAIIGVGVFAVVALNRYNKTTAGKLQIDKLLLSLPVLGDLLRKSAVSRFTRTLGTLISSGVSILDGLEITARTAGNMVIHNAVMESRASIAGGETIAAPLQKSKVFPPMVISMIAVGEQTGGLDEMLTKIADFYDDEVDAAVSALLSLLEPIMIVVLGVIVGGMVVAMYLPIFDMVNAVQ*