ggKbase home page

13_1_20cm_2_scaffold_199

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_199_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1..468
DNA (468bp) protein (156aa)
mgh; 3-methyladenine DNA glycosylase (EC:3.2.2.-); K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RBG_16_Gemmatimonadetes_66_8_curated
mgh; 3-methyladenine DNA glycosylase (EC:3.2.2.-)
Putative 3-methyladenine DNA glycosylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A637_GEMAT
13_1_20cm_2_scaffold_199_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(477..1643)
DNA (1167bp) protein (389aa)
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_2_scaffold_199_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1819..4299)
DNA (2481bp) protein (827aa)
peptidase M14 n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B386AD
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
carboxypeptidase
13_1_20cm_2_scaffold_199_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4299..5492)
DNA (1194bp) protein (398aa)
kbl; putative 2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29); K00639 glycine C-acetyltransferase [EC:2.3.1.29] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
kbl; putative 2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
Putative 2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A638_GEMAT
13_1_20cm_2_scaffold_199_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5489..6517)
DNA (1029bp) protein (343aa)
threonine 3-dehydrogenase (EC:1.1.1.103); K00060 threonine 3-dehydrogenase [EC:1.1.1.103] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Threonine 3-dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A639_GEMAT rbh
Alcohol dehydrogenase GroES domain protein
13_1_20cm_2_scaffold_199_6
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6672..7415
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034CD234
Uncharacterized protein {ECO:0000313|EMBL:AKD03127.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
hypothetical protein
13_1_20cm_2_scaffold_199_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7420..10380)
DNA (2961bp) protein (987aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00036FAB17 rbh
formate dehydrogenase subunit alpha
13_1_20cm_2_scaffold_199_8
unknown

Not on your lists

10454..11176
DNA (723bp) protein (241aa)

This feature has no annotations

13_1_20cm_2_scaffold_199_9
unknown

Not on your lists

comp(11228..11395)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_20cm_2_scaffold_199_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11513..12337)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A642_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_199_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(12331..13209)
DNA (879bp) protein (293aa)
UPI0003D1A038 related cluster n=1 Tax=unknown RepID=UPI0003D1A038
cation diffusion facilitator family transporter Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cation diffusion facilitator family transporter
13_1_20cm_2_scaffold_199_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13288..13560
DNA (273bp) protein (91aa)
Putative transcriptional regulator n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P2V7_9FIRM
transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative transcriptional regulator
13_1_20cm_2_scaffold_199_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13553..14197
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI0003029201
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_199_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14184..15182
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00037B408F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
alpha/beta hydrolase
13_1_20cm_2_scaffold_199_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15179..16342)
DNA (1164bp) protein (388aa)
hypothetical protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A645_GEMAT
S-adenosylmethionine-dependent methyltransferase
13_1_20cm_2_scaffold_199_16
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(16339..16716)
DNA (378bp) protein (126aa)
Chorismate mutase {ECO:0000313|EMBL:ABQ90738.1}; EC=5.4.99.5 {ECO:0000313|EMBL:ABQ90738.1};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae;
Chorismate mutase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVT5_ROSS1
chorismate mutase
13_1_20cm_2_scaffold_199_17
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16742..17374
DNA (633bp) protein (211aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamine-phosphate synthase n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6FFP4_9DELT
thiE; thiamine-phosphate pyrophosphorylase
13_1_20cm_2_scaffold_199_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17289..18371)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A647_GEMAT
Aminodeoxychorismate lyase {ECO:0000313|EMBL:AHG90157.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
aminodeoxychorismate lyase
13_1_20cm_2_scaffold_199_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18368..18802)
DNA (435bp) protein (145aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative Holliday junction resolvase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A648_GEMAT
Holliday junction resolvase
13_1_20cm_2_scaffold_199_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18799..20010)
DNA (1212bp) protein (404aa)
Transcription termination factor Rho n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LEU2_9BACT
rho; transcription termination factor; K03628 transcription termination factor Rho Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcription termination factor Rho
13_1_20cm_2_scaffold_199_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

20549..21613
DNA (1065bp) protein (355aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_2_scaffold_199_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

21613..21795
DNA (183bp) protein (61aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_2_scaffold_199_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21817..23679)
DNA (1863bp) protein (621aa)
Integral membrane protein n=1 Tax=Pseudomonas stutzeri TS44 RepID=I4JNY0_PSEST
Uncharacterized protein {ECO:0000313|EMBL:AHG89993.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF95 transmembrane
13_1_20cm_2_scaffold_199_24
Verrucomicrobia bacterium SCGC AAA164-E04, Verrucomicrobia, Bacteria

Not on your lists

23755..24636
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00035EB6EA
13_1_20cm_2_scaffold_199_25
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

24642..25268
DNA (627bp) protein (209aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_2_scaffold_199_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

25237..27363
DNA (2127bp) protein (709aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
ATPase, AAA family n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KL15_9ACTO
ATPase associated with various cellular activities AAA_3
13_1_20cm_2_scaffold_199_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

27360..28676
DNA (1317bp) protein (439aa)
Putative conserved protein (Some members contain a von Willebrand factor type A (VWA) domain) n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGY1_CHLTF
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
protein of unknown function DUF58
13_1_20cm_2_scaffold_199_28
unknown

Not on your lists

28743..30464
DNA (1722bp) protein (574aa)

This feature has no annotations

13_1_20cm_2_scaffold_199_29
unknown

Not on your lists

30461..30568
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 29 items

View Taxonomy