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13_1_20cm_2_scaffold_3135

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3135_1
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(3..218)
DNA (216bp) protein (72aa)
X-Pro dipeptidyl-peptidase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C46C7
putative hydrolase; K06978 Tax=RBG_16_Aminicenantes_66_30_curated
hydrolase CocE/NonD family protein
13_1_20cm_2_scaffold_3135_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(328..1209)
DNA (882bp) protein (294aa)
Aminotransferase, class IV superfamily n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S546_SALRD
Aminotransferase, class IV superfamily {ECO:0000313|EMBL:ABC43848.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
aminotransferase
13_1_20cm_2_scaffold_3135_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1249..2262)
DNA (1014bp) protein (338aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
2-oxoglutarate ferredoxin oxidoreductase beta subunit n=1 Tax=uncultured bacterium W5-51b RepID=H9BX70_9BACT
2-oxoacid:ferredoxin oxidoreductase subunit beta
13_1_20cm_2_scaffold_3135_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2259..4124)
DNA (1866bp) protein (622aa)
2-oxoglutarate ferredoxin oxidoreductase alpha subunit n=1 Tax=uncultured bacterium W5-51b RepID=H9BX69_9BACT
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein
13_1_20cm_2_scaffold_3135_5
Cedecea neteri, Cedecea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4387..5481
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003685F01
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIR69571.1}; TaxID=158822 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cedecea.;" source="
ABC transporter substrate-binding protein
13_1_20cm_2_scaffold_3135_6
unknown

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comp(5387..6583)
DNA (1197bp) protein (399aa)

This feature has no annotations

13_1_20cm_2_scaffold_3135_7
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7113..8474
DNA (1362bp) protein (454aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HFU2_ANADF
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABS27588.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterinea
two component sigma54 specific Fis family transcriptional regulator
13_1_20cm_2_scaffold_3135_8
Crocosphaera watsonii, Crocosphaera, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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8640..9584
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00035F1404
TPR repeat:Sel1-like repeat:Sel1-like repeat {ECO:0000313|EMBL:EAM52985.1}; Flags: Precursor;; TaxID=165597 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Crocosphaera.;" sour
TPR domain protein
13_1_20cm_2_scaffold_3135_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(9541..10527)
DNA (987bp) protein (329aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UZ94_TERSS
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
13_1_20cm_2_scaffold_3135_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10533..11456)
DNA (924bp) protein (308aa)
L-proline dehydrogenase (EC:1.5.99.8); K00318 proline dehydrogenase [EC:1.5.99.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
Proline dehydrogenase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SV36_9BACT alias=16ft_combo_ws3_scaffold_136_4 id=5223515 tax=16ft_combo_ws3 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
putative proline dehydrogenase
13_1_20cm_2_scaffold_3135_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11541..12416)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA91_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_3135_12
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12577..13785)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Desulfovibrio longus RepID=UPI0003B7B3E2
hypothetical protein Tax=RBG_13_Deltaproteobacteria_52_11_curated
hypothetical protein
13_1_20cm_2_scaffold_3135_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13817..14515
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HER7_ANADF
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
13_1_20cm_2_scaffold_3135_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14512..14748)
DNA (237bp) protein (79aa)
Probable DNA repair protein Helmi_22680 n=2 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=Y2268_HELMI
Ku family containing protein; K10979 DNA end-binding protein Ku Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ku domain-containing protein; K10979 DNA end-binding protein Ku
13_1_20cm_2_scaffold_3135_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

15263..17803
DNA (2541bp) protein (847aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RBG_16_Acidobacteria_70_10_curated
DNA ligase D n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8V2_ANADF
DNA ligase D
13_1_20cm_2_scaffold_3135_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17811..17960)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACL1_GEMAT
hypothetical protein
Displaying 16 items

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