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13_1_20cm_2_scaffold_389

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_389_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..247)
DNA (246bp) protein (82aa)
pykA; pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=RBG_16_Gemmatimonadetes_66_8_curated
UPI0003176C5C related cluster n=1 Tax=unknown RepID=UPI0003176C5C
pyruvate kinase II
13_1_20cm_2_scaffold_389_2
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(308..769)
DNA (462bp) protein (154aa)
MarR family transcriptional regulator n=1 Tax=Sphingobium indicum B90A RepID=I5B8D3_9SPHN
MarR family transcriptional regulator {ECO:0000313|EMBL:EIM65835.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp
MarR family transcriptional regulator
13_1_20cm_2_scaffold_389_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

855..1574
DNA (720bp) protein (240aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A524_GEMAT rbh
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAH37334.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas
putative ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_389_4
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1571..3304
DNA (1734bp) protein (578aa)
Putative ABC transporter, permease protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBL2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KFE67009.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
hypothetical protein
13_1_20cm_2_scaffold_389_5
unknown

Not on your lists

comp(3305..3682)
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_20cm_2_scaffold_389_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

3709..4287
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XDG1_NAKMY
hypothetical protein Tax=RBG_16_Chloroflexi_63_12_curated
hypothetical protein
13_1_20cm_2_scaffold_389_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4284..4676)
DNA (393bp) protein (131aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_2_scaffold_389_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4797..7286)
DNA (2490bp) protein (830aa)
nrdJ; ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribonucleoside-diphosphate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X4_GEMAT
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
13_1_20cm_2_scaffold_389_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(7469..8011)
DNA (543bp) protein (181aa)
Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKR7_SINAD
Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase {ECO:0000313|EMBL:AGA29852.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomyceta
carbonic anhydrase/acetyltransferase
13_1_20cm_2_scaffold_389_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7975..9873)
DNA (1899bp) protein (633aa)
putative serine/threonine protein kinase; K11912 serine/threonine-protein kinase PpkA [EC:2.7.11.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
serine/threonine protein kinase n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B765FC
protein kinase
13_1_20cm_2_scaffold_389_11
unknown

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comp(9929..12175)
DNA (2247bp) protein (749aa)

This feature has no annotations

13_1_20cm_2_scaffold_389_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12215..14980)
DNA (2766bp) protein (922aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X2_GEMAT
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AHG90382.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
WD40-like beta Propeller containing protein
13_1_20cm_2_scaffold_389_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14977..16425)
DNA (1449bp) protein (483aa)
putative N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X1_GEMAT
cell wall hydrolase/autolysin
13_1_20cm_2_scaffold_389_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

16840..17898
DNA (1059bp) protein (353aa)
FHA domain containing protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JH38_ANAD2
FHA domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
FHA domain-containing protein
13_1_20cm_2_scaffold_389_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18068..19099
DNA (1032bp) protein (344aa)
putative serine/threonine protein phosphatase (EC:3.1.3.16); K01090 protein phosphatase [EC:3.1.3.16] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative serine/threonine protein phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X0_GEMAT
protein phosphatase 2C domain protein
13_1_20cm_2_scaffold_389_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19096..20280
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PYR0_9BACT
FHA domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_389_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20219..20401
DNA (183bp) protein (61aa)
FHA domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_389_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20388..21797)
DNA (1410bp) protein (470aa)
glycosidase (EC:3.2.1.-); K05349 beta-glucosidase [EC:3.2.1.21] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Glycosidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W9_GEMAT
glycoside hydrolase family 3 domain protein
13_1_20cm_2_scaffold_389_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21794..22915)
DNA (1122bp) protein (374aa)
anmK; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4J5_THERP alias=16ft_combo_ws3_scaffold_19542_11 id=5224368 tax=16ft_combo_ws3 species=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi
Anhydro-N-acetylmuramic acid kinase
13_1_20cm_2_scaffold_389_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(22912..23868)
DNA (957bp) protein (319aa)
hypothetical protein; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W7_GEMAT
N-acetylmuramic acid 6-phosphate etherase
13_1_20cm_2_scaffold_389_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

23931..25715
DNA (1785bp) protein (595aa)
Gamma-glutamyltranspeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W5_GEMAT rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
gamma-glutamyltransferase
13_1_20cm_2_scaffold_389_22
unknown

Not on your lists

25727..26209
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_20cm_2_scaffold_389_23
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

26220..26780
DNA (561bp) protein (187aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein alias=RAAC39_AAC7_scaffold_67_180,RAAC39_C00004G00180 id=717838 tax=RAAC39 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia
hypothetical protein
13_1_20cm_2_scaffold_389_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(26777..27529)
DNA (753bp) protein (251aa)
Transport-associated protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X2A9_ACISM alias=16ft_combo_ws3_scaffold_1271_5 id=5223475 tax=16ft_combo_ws3 species=Acidobacterium sp. (strain MP5ACTX9) genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_2_scaffold_389_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27651..28382)
DNA (732bp) protein (244aa)
ccdA; cytochrome c-type biogenesis protein CcdA (EC:1.8.-.-); K06196 cytochrome c-type biogenesis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ccdA; cytochrome c-type biogenesis protein CcdA (EC:1.8.-.-)
Cytochrome c-type biogenesis protein CcdA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W2_GEMAT
13_1_20cm_2_scaffold_389_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(28375..28920)
DNA (546bp) protein (182aa)
pdaD; pyruvoyl-dependent arginine decarboxylase; K02626 arginine decarboxylase [EC:4.1.1.19] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pyruvoyl-dependent arginine decarboxylase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5654E
pyruvoyl-dependent arginine decarboxylase
13_1_20cm_2_scaffold_389_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(28971..29306)
DNA (336bp) protein (112aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_2_scaffold_389_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(29267..30391)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MZV0_CORCM
Uncharacterized protein {ECO:0000313|EMBL:AHG90363.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_2_scaffold_389_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(30465..32714)
DNA (2250bp) protein (750aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=861299 species="Bacteria; G
Primosomal protein N n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6V7_GEMAT
primosomal protein N
13_1_20cm_2_scaffold_389_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(32711..33148)
DNA (438bp) protein (146aa)
Putative dipeptide epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6V6_GEMAT
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:AHG90361.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Mandelate racemase/muconate lactonizing protein
Displaying 30 items

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