ggKbase home page

13_1_20cm_2_scaffold_6480

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_6480_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2..184
DNA (183bp) protein (61aa)
ATP synthase subunit b n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABC4_GEMAT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
ATP synthase subunit b
13_1_20cm_2_scaffold_6480_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

189..731
DNA (543bp) protein (181aa)
atpH; ATP synthase subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP synthase subunit delta n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ATPD_GEMAT
ATP synthase subunit delta
13_1_20cm_2_scaffold_6480_3
unknown

Not on your lists

comp(807..1175)
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_20cm_2_scaffold_6480_4
unknown

Not on your lists

comp(1186..1632)
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_20cm_2_scaffold_6480_5
CG_Deferri_01, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

1791..4748
DNA (2958bp) protein (986aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI0003822517
hypothetical protein Tax=CG_Deferri_01
hypothetical protein
13_1_20cm_2_scaffold_6480_6
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4718..5317
DNA (600bp) protein (200aa)
Putative ferredoxin n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67S42_SYMTH
Putative ferredoxin {ECO:0000313|EMBL:BAD39501.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (s
ferredoxin
13_1_20cm_2_scaffold_6480_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5314..5667
DNA (354bp) protein (118aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCP2_ANADF
cupin domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cupin
13_1_20cm_2_scaffold_6480_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5727..6611
DNA (885bp) protein (295aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABC1_GEMAT
Nucleotidyl transferase
13_1_20cm_2_scaffold_6480_9
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6619..8667)
DNA (2049bp) protein (683aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QLH1_DESB2
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ADK86406.1}; TaxID=644282 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="D
PAS/PAC sensor hybrid histidine kinase
13_1_20cm_2_scaffold_6480_10

Not on your lists

8731..9249
DNA (519bp) protein (173aa)
DinB family protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFF0_9BACT
DinB family protein {ECO:0000313|EMBL:EQB63164.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
hypothetical protein
13_1_20cm_2_scaffold_6480_11
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9310..9960
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E19934
TetR family transcriptional regulator {ECO:0000313|EMBL:KIF81779.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="He
TetR family transcriptional regulator
13_1_20cm_2_scaffold_6480_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9938..10654
DNA (717bp) protein (239aa)
Outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R3_GEMAT
Outer membrane efflux protein {ECO:0000313|EMBL:AHG89974.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
outer membrane efflux protein
Displaying 12 items

View Taxonomy