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13_1_40cm_3_scaffold_1181

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1181_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2..844
DNA (843bp) protein (281aa)
Putative Co/Zn/Cd efflux system membrane fusion protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HHB3_9PROT
RND family efflux transporter MFP subunit Tax=GWC2_Gemmatimonadetes_71_10_curated
probable RND efflux membrane fusion protein
13_1_40cm_3_scaffold_1181_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(841..3246)
DNA (2406bp) protein (802aa)
Putative uncharacterized protein n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3AU50_CHLCH rbh
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Protein of unknown function DUF2723
13_1_40cm_3_scaffold_1181_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3259..4803)
DNA (1545bp) protein (515aa)
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.
Bifunctional purine biosynthesis protein PurH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W1_GEMAT
Bifunctional purine biosynthesis protein purH
13_1_40cm_3_scaffold_1181_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(4916..5872)
DNA (957bp) protein (319aa)
Peptidase family protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZEB7_TERRK
peptidase M42 family protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
peptidase family protein
13_1_40cm_3_scaffold_1181_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6946..7521)
DNA (576bp) protein (192aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
Phosphoribosylglycinamide formyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG23_RHOMR
phosphoribosylglycinamide formyltransferase
13_1_40cm_3_scaffold_1181_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7521..9197)
DNA (1677bp) protein (559aa)
Bacterial pre-peptidase C-terminal domain protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZCN8_9CAUL
peptidase C14 caspase catalytic subunit P20 Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase domain protein
13_1_40cm_3_scaffold_1181_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(9248..9802)
DNA (555bp) protein (185aa)
gmhB; D,D-heptose 1,7-bisphosphate phosphatase (EC:3.1.3.-); K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B6I7_HERA2
histidinol-phosphate phosphatase family protein
13_1_40cm_3_scaffold_1181_8
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9795..11138)
DNA (1344bp) protein (448aa)
selenocysteine synthase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine sy
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67L70_SYMTH rbh
13_1_40cm_3_scaffold_1181_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(11135..12535)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_1181_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(12478..15120)
DNA (2643bp) protein (881aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Valine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W5_GEMAT rbh
Valyl-tRNA synthetase
13_1_40cm_3_scaffold_1181_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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15339..17243
DNA (1905bp) protein (635aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7W7_GEMAT
13_1_40cm_3_scaffold_1181_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

17350..18513
DNA (1164bp) protein (388aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Acetyl-CoA C-acetyltransferase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MRQ1_9BACT
acetyl-CoA acetyltransferase
13_1_40cm_3_scaffold_1181_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18513..19076
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZF11_TERRK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_1181_14
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

19076..19939
DNA (864bp) protein (288aa)
Abortive infection protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V6K5_TERSS
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:ADV82744.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC
13_1_40cm_3_scaffold_1181_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19936..20619
DNA (684bp) protein (228aa)
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XNS6_9BACT
13_1_40cm_3_scaffold_1181_16
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20616..20741
DNA (126bp) protein (42aa)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HPG7_PSEUO
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:KES21151.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo
13_1_40cm_3_scaffold_1181_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

20725..21618
DNA (894bp) protein (298aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=GWC2_Gemmatimonadetes_71_10_curated
Acyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X4_GEMAT
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_3_scaffold_1181_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21641..21835
DNA (195bp) protein (65aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X4_GEMAT
13_1_40cm_3_scaffold_1181_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21774..22904
DNA (1131bp) protein (377aa)
leucine dehydrogenase (EC:1.4.1.9); K00263 leucine dehydrogenase [EC:1.4.1.9] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Leucine dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X5_GEMAT
Glu/Leu/Phe/Val dehydrogenase
13_1_40cm_3_scaffold_1181_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23055..23492
DNA (438bp) protein (146aa)
rpiB; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:BAH38336.1}; EC=5.3.1.6 {ECO:0000313|EMBL:BAH38336.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatim
Ribose 5-phosphate isomerase B n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DBI6_9BACT
13_1_40cm_3_scaffold_1181_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

23538..24800
DNA (1263bp) protein (421aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Serine hydroxymethyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7X7_GEMAT
Serine hydroxymethyltransferase
13_1_40cm_3_scaffold_1181_22
unknown

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24933..25742
DNA (810bp) protein (270aa)

This feature has no annotations

13_1_40cm_3_scaffold_1181_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

26791..27636
DNA (846bp) protein (282aa)
TonB family protein
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_1181_24
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

28836..29345
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002FB5567
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AFZ29214.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
13_1_40cm_3_scaffold_1181_25
RBG_19FT_COMBO_Aminicenantes_59_29_curated, Aminicenantes, Bacteria

Not on your lists

29375..30175
DNA (801bp) protein (267aa)
hypothetical protein; K01822 steroid delta-isomerase [EC:5.3.3.1] id=24452309 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein; K01822 steroid delta-isomerase [EC:5.3.3.1] Tax=RBG_19FT_COMBO_Aminicenantes_59_29_curated
13_1_40cm_3_scaffold_1181_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(30234..32201)
DNA (1968bp) protein (656aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003702B28 rbh
LVIVD repeat-containing protein
LVIVD repeat-containing protein {ECO:0000313|EMBL:AHG91658.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_1181_27
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(32210..32797)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI0003757CC5
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF305
13_1_40cm_3_scaffold_1181_28
unknown

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32835..33347
DNA (513bp) protein (171aa)

This feature has no annotations

13_1_40cm_3_scaffold_1181_29
unknown

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33396..34058
DNA (663bp) protein (221aa)

This feature has no annotations

13_1_40cm_3_scaffold_1181_30
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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34182..35033
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NU85_GRAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEU38720.1}; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella malle
Displaying items 1-30 of 35 in total

View Taxonomy