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13_1_40cm_3_scaffold_1080

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1080_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1..477
DNA (477bp) protein (159aa)
cya; adenylate cyclase (EC:4.6.1.1); K01768 adenylate cyclase [EC:4.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Adenylate cyclase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F5A0_SORC5
adenylyl cyclase class-3/4/guanylyl cyclase
13_1_40cm_3_scaffold_1080_2
Shimwellia blattae, Shimwellia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(563..943)
DNA (381bp) protein (127aa)
Maf-like protein EBL_c03460 n=1 Tax=Shimwellia blattae (strain ATCC 29907 / DSM 4481 / JCM 1650 / NBRC 105725 / CDC 9005-74) RepID=I2B4M0_SHIBC
yhdE; maf-like protein YhdE
Maf-like protein EBL_c03460 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=630626 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shimwellia.;" source="Shimwel
13_1_40cm_3_scaffold_1080_3
unknown

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1174..1452
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_3_scaffold_1080_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1380..3215)
DNA (1836bp) protein (612aa)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_7
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB63_GEMAT
13_1_40cm_3_scaffold_1080_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(3200..4618)
DNA (1419bp) protein (473aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10); K01840 phosphomannomutase [EC:5.4.2.8] Tax=RBG_16_Gemmatimonadetes_66_8_curated
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB64_GEMAT rbh
13_1_40cm_3_scaffold_1080_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(4622..5707)
DNA (1086bp) protein (362aa)
Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB66_GEMAT
putative two-component response regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
response regulator receiver
13_1_40cm_3_scaffold_1080_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5766..6935
DNA (1170bp) protein (390aa)
metC; cystathionine beta-lyase (EC:4.4.1.8); K01758 cystathionine gamma-lyase [EC:4.4.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cystathionine beta-lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB67_GEMAT
Cys/Met metabolism pyridoxal-phosphate-dependent protein
13_1_40cm_3_scaffold_1080_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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7030..8025
DNA (996bp) protein (332aa)
Peptidase M48 family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB68_GEMAT
peptidase M48 family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase M48 family protein
13_1_40cm_3_scaffold_1080_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8022..9329
DNA (1308bp) protein (436aa)
phosphoribosylamine/glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SKC7_RHOMR
13_1_40cm_3_scaffold_1080_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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9313..10140
DNA (828bp) protein (276aa)
mutM; formamidopyrimidine-DNA glycosylase/AP lyase (EC:3.2.2.23 4.2.99.18); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
mutM; formamidopyrimidine-DNA glycosylase/AP lyase (EC:3.2.2.23 4.2.99.18)
Formamidopyrimidine-DNA glycosylase/AP lyase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB70_GEMAT
13_1_40cm_3_scaffold_1080_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10218..10727)
DNA (510bp) protein (170aa)
protein of unknown function DUF1854
Uncharacterized protein {ECO:0000313|EMBL:AHG92934.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Putative uncharacterized protein id=4992536 bin=GWA2__Bacteriovorax-rel_49_15 species=Planctomyces limnophilus genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
13_1_40cm_3_scaffold_1080_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(10803..13070)
DNA (2268bp) protein (756aa)
ABC transporter transmembrane region n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0RX90_9DELT
ABC transporter transmembrane region {ECO:0000313|EMBL:AHG92935.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ABC transporter transmembrane region
13_1_40cm_3_scaffold_1080_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(13353..14834)
DNA (1482bp) protein (494aa)
Putative outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADU1_GEMAT rbh
putative outer membrane efflux protein
Putative outer membrane efflux protein {ECO:0000313|EMBL:BAH40668.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurant
13_1_40cm_3_scaffold_1080_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(14839..15183)
DNA (345bp) protein (115aa)
Hypothetical membrane protein id=4504315 bin=GWC2_Methylomirabilis_70_16 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
protein of unknown function DUF214
Hypothetical membrane protein {ECO:0000313|EMBL:BAH40669.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
Displaying 14 items

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