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13_1_40cm_3_scaffold_3410

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_3410_1
unknown

Not on your lists

comp(3..167)
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_3_scaffold_3410_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(164..1120)
DNA (957bp) protein (319aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
ATPase n=2 Tax=Streptomyces bottropensis RepID=M3ENW7_9ACTO
ATPase associated with various cellular activities AAA_3
13_1_40cm_3_scaffold_3410_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1078..2337)
DNA (1260bp) protein (420aa)
hypothetical protein
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_3_scaffold_3410_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2321..2893)
DNA (573bp) protein (191aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_3_scaffold_3410_5
unknown

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comp(2977..3765)
DNA (789bp) protein (263aa)

This feature has no annotations

13_1_40cm_3_scaffold_3410_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3915..5672
DNA (1758bp) protein (586aa)
Integral membrane protein n=1 Tax=Pseudomonas sp. Chol1 RepID=K5Z9G2_9PSED
protein of unknown function DUF95 transmembrane
Uncharacterized protein {ECO:0000313|EMBL:AHG89993.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_3410_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5647..6762)
DNA (1116bp) protein (372aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_3410_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6759..7895)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B53678
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_3410_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8305..8490)
DNA (186bp) protein (62aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_3410_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(8490..8774)
DNA (285bp) protein (95aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_3_scaffold_3410_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8843..9910)
DNA (1068bp) protein (356aa)
Putative membrane-associated Zn-dependent protease n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCK7_DESTA
putative membrane-associated Zn-dependent protease Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative membrane-associated Zn-dependent protease
13_1_40cm_3_scaffold_3410_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10164..10694
DNA (531bp) protein (177aa)
Transcription termination factor Rho n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LEU2_9BACT
rho; transcription termination factor; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
transcription termination factor Rho
13_1_40cm_3_scaffold_3410_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10688..11215
DNA (528bp) protein (176aa)
Transcription termination factor Rho n=1 Tax=alpha proteobacterium RS24 RepID=U2WSV3_9PROT
rho; transcription termination factor; K03628 transcription termination factor Rho Tax=RBG_16_Gemmatimonadetes_66_8_curated
transcription termination factor Rho
13_1_40cm_3_scaffold_3410_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11212..11655
DNA (444bp) protein (148aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative Holliday junction resolvase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A648_GEMAT
Holliday junction resolvase
13_1_40cm_3_scaffold_3410_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11660..12625
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A647_GEMAT
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:AHG90157.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_3410_16
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(12667..13260)
DNA (594bp) protein (198aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
Thiamine-phosphate synthase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I501_CALAS
thiE; thiamine-phosphate pyrophosphorylase
13_1_40cm_3_scaffold_3410_17
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

13286..13654
DNA (369bp) protein (123aa)
chorismate mutase; K06208 chorismate mutase [EC:5.4.99.5] Tax=RBG_16_Chloroflexi_63_12_curated
aroH; chorismate mutase (EC:5.4.99.5)
monofunctional chorismate mutase, clade 1 id=24447245 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermus oshimai genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
13_1_40cm_3_scaffold_3410_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13651..14805
DNA (1155bp) protein (385aa)
hypothetical protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A645_GEMAT
S-adenosylmethionine-dependent methyltransferase
13_1_40cm_3_scaffold_3410_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14839..15804)
DNA (966bp) protein (322aa)
Lysophospholipase n=1 Tax=Pseudomonas sp. GM49 RepID=J3B2K6_9PSED
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
alpha/beta hydrolase
13_1_40cm_3_scaffold_3410_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15791..16435)
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Geobacillus RepID=E3ICG3_GEOS0
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_3410_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16428..16715)
DNA (288bp) protein (96aa)
Putative transcriptional regulator n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMZ1_9FIRM
ArsR; transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative transcriptional regulator
13_1_40cm_3_scaffold_3410_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

16795..17673
DNA (879bp) protein (293aa)
Cation diffusion facilitator family transporter n=2 Tax=Synechococcus elongatus RepID=Q31LQ0_SYNE7
cation diffusion facilitator family transporter Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cation efflux system protein
13_1_40cm_3_scaffold_3410_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17667..18413
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A642_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
Displaying 23 items

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