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13_1_40cm_3_scaffold_358

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_358_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2..937
DNA (936bp) protein (312aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_3_scaffold_358_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

934..4398
DNA (3465bp) protein (1155aa)
Chromosome partition protein Smc n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M6_GEMAT
chromosome segregation protein; K03529 chromosome segregation protein Tax=GWC2_Gemmatimonadetes_71_10_curated
chromosome segregation protein SMC
13_1_40cm_3_scaffold_358_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

4431..6716
DNA (2286bp) protein (762aa)
Subtilisin-like protein serine protease n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LGU0_9BACT
Subtilisin-like serine protease Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
subtilisin-like serine protease
13_1_40cm_3_scaffold_358_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

6719..7492
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_3_scaffold_358_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7496..8488
DNA (993bp) protein (331aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M3_GEMAT
phospho-2-dehydro-3-deoxyheptonate aldolase
13_1_40cm_3_scaffold_358_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8530..9171
DNA (642bp) protein (214aa)
Outer-membrane lipoprotein carrier protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M2_GEMAT
lolA; outer-membrane lipoprotein carrier protein precursor; K03634 outer membrane lipoprotein carrier protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
lolA; outer-membrane lipoprotein carrier protein precursor
13_1_40cm_3_scaffold_358_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9095..10027)
DNA (933bp) protein (311aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQA9_ROSCS
NADP oxidoreductase coenzyme F420-dependent Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NADP oxidoreductase coenzyme F420-dependent
13_1_40cm_3_scaffold_358_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10024..11604)
DNA (1581bp) protein (527aa)
ctpA; carboxyl-terminal processing protease precursor (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Carboxyl-terminal processing protease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7M0_GEMAT
carboxyl-terminal protease
13_1_40cm_3_scaffold_358_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(11604..12245)
DNA (642bp) protein (214aa)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] Tax=GWC2_Gemmatimonadetes_71_10_curated
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2B8_SPHTD
13_1_40cm_3_scaffold_358_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12256..12609)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L8_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF964
13_1_40cm_3_scaffold_358_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12609..13427)
DNA (819bp) protein (273aa)
putative methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Release factor glutamine methyltransferase n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G1E4_9GAMM
protein-(glutamine-N5) methyltransferase, release factor-specific
13_1_40cm_3_scaffold_358_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13420..14664)
DNA (1245bp) protein (415aa)
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=GWC2_Gemmatimonadetes_71_10_curated
Peptide chain release factor 1
Peptide chain release factor 1 id=4980433 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_3_scaffold_358_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14784..15458
DNA (675bp) protein (225aa)
Crp family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7L5_GEMAT
Crp family transcriptional regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
cyclic nucleotide-binding protein
13_1_40cm_3_scaffold_358_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

15545..16411
DNA (867bp) protein (289aa)
Putative phytochrome sensor protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UA81_METS4
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative phytochrome sensor protein
13_1_40cm_3_scaffold_358_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16426..17127
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEH8_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_3_scaffold_358_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

17212..19374
DNA (2163bp) protein (721aa)
metal dependent phosphohydrolase Tax=GWC2_Gemmatimonadetes_71_10_curated
Metal dependent phosphohydrolase id=4372559 bin=GWA2_Planctomycetia_40_7 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
hypothetical protein
13_1_40cm_3_scaffold_358_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(19474..21018)
DNA (1545bp) protein (515aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATD9_RUBXD
Hydantoinase B/oxoprolinase
13_1_40cm_3_scaffold_358_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21015..23054)
DNA (2040bp) protein (680aa)
5-oxoprolinase; K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
5-oxoprolinase (EC:3.5.2.9)
hydantoinase n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00035F868F rbh
13_1_40cm_3_scaffold_358_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23051..24583)
DNA (1533bp) protein (511aa)
lnt-1; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Apolipoprotein N-acyltransferase n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EGF7_GEOBB
lnt-1; apolipoprotein N-acyltransferase
13_1_40cm_3_scaffold_358_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(24595..25602)
DNA (1008bp) protein (336aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K9_GEMAT
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
oxidoreductase domain protein
13_1_40cm_3_scaffold_358_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(25599..26252)
DNA (654bp) protein (218aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_358_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(26293..27558)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K8_GEMAT
hypothetical protein; K06381 stage II sporulation protein D Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
SpoIID/LytB domain protein
13_1_40cm_3_scaffold_358_23
Thermosynechococcus sp. NK55a, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(27527..28813)
DNA (1287bp) protein (429aa)
hemL; glutamate-1-semialdehyde aminomutase HemL (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
Glutamate-1-semialdehyde aminomutase HemL n=1 Tax=Thermosynechococcus sp. NK55 RepID=V5V821_9CHRO
13_1_40cm_3_scaffold_358_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(28810..30117)
DNA (1308bp) protein (436aa)
hypothetical protein; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K6_GEMAT
Ribosomal protein S12 methylthiotransferase rimO
13_1_40cm_3_scaffold_358_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(30114..30617)
DNA (504bp) protein (168aa)
hypothetical protein; K09767 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0234 protein yajQ
hypothetical protein; K09767 hypothetical protein id=12555050 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_40cm_3_scaffold_358_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(30645..31502)
DNA (858bp) protein (286aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K2_GEMAT
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Gemmatimonadetes_66_8_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_3_scaffold_358_27
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(31536..32183)
DNA (648bp) protein (216aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Signal peptidase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC84_GEMAT
signal peptidase I
13_1_40cm_3_scaffold_358_28
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32627..33775)
DNA (1149bp) protein (383aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCF4_ANASK
UBA/THIF-type NAD/FAD binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ACG74790.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaerom
13_1_40cm_3_scaffold_358_29
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33813..34016)
DNA (204bp) protein (68aa)
ThiamineS protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGE1_ANADF
sulfur transfer protein ThiS
ThiamineS protein {ECO:0000313|EMBL:ABS27787.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source=
13_1_40cm_3_scaffold_358_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(34013..34981)
DNA (969bp) protein (323aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
Homoserine kinase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KFH9_9FIRM
Homoserine kinase
Displaying items 1-30 of 50 in total

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