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13_1_40cm_3_scaffold_507

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_507_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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2..196
DNA (195bp) protein (65aa)
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=RBG_16_Actinobacteria_67_10_curated
cold-shock protein
Cold-shock DNA-binding domain protein id=2197703 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_3_scaffold_507_2
unknown

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267..812
DNA (546bp) protein (182aa)

This feature has no annotations

13_1_40cm_3_scaffold_507_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(809..1732)
DNA (924bp) protein (308aa)
Probable ADP-ribosylglycohydrolase {ECO:0000313|EMBL:CAI50030.1}; EC=3.2.2.- {ECO:0000313|EMBL:CAI50030.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
Probable ADP-ribosylglycohydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPC1_NATPD
ADP-ribosylglycohydrolase
13_1_40cm_3_scaffold_507_4
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1756..2559
DNA (804bp) protein (268aa)
Putative Peptidase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YVH5_9BACT
alpha/beta superfamily hydrolase
Tax=BJP_IG2069_Desfulfarculales_53_13
13_1_40cm_3_scaffold_507_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(2552..3394)
DNA (843bp) protein (281aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_507_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3583..4542
DNA (960bp) protein (320aa)
Putative branched-chain amino acid-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N5_GEMAT
putative branched-chain amino acid-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative branched-chain amino acid-binding protein
13_1_40cm_3_scaffold_507_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4539..6209
DNA (1671bp) protein (557aa)
Methyl-accepting chemotaxis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N4_GEMAT
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis protein
13_1_40cm_3_scaffold_507_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(6206..6538)
DNA (333bp) protein (111aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_507_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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6916..7131
DNA (216bp) protein (72aa)
Translation initiation factor IF-1 n=2 Tax=Roseiflexus RepID=IF1_ROSCS
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_Gemmatimonadetes_66_8_curated
infA; translation initiation factor IF-1
13_1_40cm_3_scaffold_507_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7133..7858)
DNA (726bp) protein (242aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Signal peptidase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7K1_GEMAT
signal peptidase I
13_1_40cm_3_scaffold_507_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(7855..8874)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4Q2_GEMAT
periplasmic component of the Tol biopolymer transport system Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_3_scaffold_507_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8932..9252
DNA (321bp) protein (107aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_507_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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9249..11261
DNA (2013bp) protein (671aa)
Transketolase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKA2_9BACT
transketolase
Transketolase {ECO:0000313|EMBL:AHG89069.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_507_14
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11468..11995
DNA (528bp) protein (176aa)
ssuE; NAD(P)H-dependent FMN reductase, sulfate starvation-induced protein (EC:1.5.1.29)
NAD(P)H-dependent FMN reductase, sulfate starvation-induced protein {ECO:0000313|EMBL:CBJ38592.1}; EC=1.5.1.29 {ECO:0000313|EMBL:CBJ38592.1};; TaxID=859655 species="Bacteria; Proteobacteria; Betaprote
NAD(P)H-dependent FMN reductase, sulfate starvation-induced protein n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8N4U0_RALSL
13_1_40cm_3_scaffold_507_15
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

11992..12936
DNA (945bp) protein (315aa)
D-alanine--D-alanine ligase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QP68_9CYAN rbh
ddl; D-alanine--D-alanine ligase
D-alanine--D-alanine ligase {ECO:0000313|EMBL:AGY60741.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
13_1_40cm_3_scaffold_507_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

12936..13985
DNA (1050bp) protein (350aa)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase {ECO:0000313|EMBL:CDM64422.1}; EC=1.14.14.5 {ECO:0000313|EMBL:CDM64422.1};; TaxID=454194 species="Bacteria;
ssuD; alkanesulfonate monooxygenase (EC:1.14.14.5)
Alkanesulfonate monooxygenase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QP10_9CYAN
13_1_40cm_3_scaffold_507_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13960..15012)
DNA (1053bp) protein (351aa)
hemY2; hypothetical protein; K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
HemY2 protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G3I1_SORC5
hemY2; hypothetical protein
13_1_40cm_3_scaffold_507_18
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(15009..15932)
DNA (924bp) protein (308aa)
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFF6_9CHLR
Tax=BJP_IG2157_Anaerolineales_55_23
13_1_40cm_3_scaffold_507_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15922..16854)
DNA (933bp) protein (311aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCL2_9BACT
13_1_40cm_3_scaffold_507_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16919..17983)
DNA (1065bp) protein (355aa)
cld2; chlorite dismutase (EC:1.13.11.49); K09162 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cld2; chlorite dismutase (EC:1.13.11.49)
chlorite dismutase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC35
13_1_40cm_3_scaffold_507_21
unknown

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comp(17994..18137)
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_3_scaffold_507_22
unknown

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comp(18134..18301)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_40cm_3_scaffold_507_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(18309..19115)
DNA (807bp) protein (269aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ctaB; protoheme IX farnesyltransferase (Heme O synthase) (Heme B farnesyltransferase) (EC:2.5.1.-) id=14429801 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
protoheme IX farnesyltransferase
13_1_40cm_3_scaffold_507_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(19154..19453)
DNA (300bp) protein (100aa)
caa(3)-type oxidase, subunit IV Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Caa(3)-type oxidase, subunit IV id=1881831 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
caa(3)-type oxidase, subunit IV
13_1_40cm_3_scaffold_507_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(19464..19625)
DNA (162bp) protein (54aa)
ctaE; putative transmembrane cytochrome oxidase subunit; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Heme/copper-type cytochrome/quinol oxidase, subunit 3 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNK7_SINAD
heme/copper-type cytochrome/quinol oxidase, subunit 3
13_1_40cm_3_scaffold_507_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(19622..20137)
DNA (516bp) protein (172aa)
ctaE; putative transmembrane cytochrome oxidase subunit; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cytochrome oxidase subunit III n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B3081F
cytochrome C oxidase subunit III
13_1_40cm_3_scaffold_507_27
GWA2_OP3_52_8_curated, Omnitrophica, Bacteria

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comp(20151..20570)
DNA (420bp) protein (140aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=GWA2_OP3_52_8_curated
Cytochrome c oxidase subunit I id=1881839 bin=GWD2_Deltaproteobacteria_55_8 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cytochrome C oxidase
Displaying 27 items

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