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13_1_40cm_3_scaffold_428

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_428_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3..809
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7P1_GEMAT
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AHG88932.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_428_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(854..1621)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000381F161
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_3_scaffold_428_3
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

1694..1948
DNA (255bp) protein (85aa)
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
Uncharacterized protein id=2122842 bin=GWB2_Chloroflexi_54_36 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
13_1_40cm_3_scaffold_428_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2156..2740
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJU1_CHLTF
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_428_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

2733..3104
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E491F
transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
regulatory protein ArsR
13_1_40cm_3_scaffold_428_6
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3135..3770
DNA (636bp) protein (212aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteri
undecaprenyl pyrophosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UKU4_METS4
13_1_40cm_3_scaffold_428_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

3767..5281
DNA (1515bp) protein (505aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67L49_SYMTH
Uncharacterized protein {ECO:0000313|EMBL:CDM64633.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_40cm_3_scaffold_428_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5271..5897
DNA (627bp) protein (209aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88544.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_3_scaffold_428_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6417..7226
DNA (810bp) protein (270aa)
PhzF family phenazine biosynthesis protein; K06998 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Phenazine biosynthesis protein PhzF family id=1884744 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PhzF family phenazine biosynthesis protein
13_1_40cm_3_scaffold_428_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7223..8152
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PPP1_MEIRD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_3_scaffold_428_11
unknown

Not on your lists

comp(8149..8571)
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_40cm_3_scaffold_428_12
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8552..10564)
DNA (2013bp) protein (671aa)
dipeptidyl aminopeptidase/acylaminoacyl-peptidase Tax=GWA2_Ignavibacteria_54_16_curated
dipeptidyl aminopeptidase/acylaminoacyl-peptidase id=24432021 bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
peptidase S9, prolyl oligopeptidase active site region
13_1_40cm_3_scaffold_428_13
unknown

Not on your lists

comp(10564..10821)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_3_scaffold_428_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10869..11864
DNA (996bp) protein (332aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-oxoacyl-(Acyl-carrier-protein) synthase III n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H679_ANADF
3-oxoacyl-(acyl-carrier-protein) synthase III
13_1_40cm_3_scaffold_428_15
unknown

Not on your lists

comp(11833..12507)
DNA (675bp) protein (225aa)

This feature has no annotations

13_1_40cm_3_scaffold_428_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12580..12846
DNA (267bp) protein (89aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_3_scaffold_428_17
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(12843..13727)
DNA (885bp) protein (295aa)
metal dependent phosphohydrolase Tax=RBG_16_Zixibacteria_43_9_curated
metal dependent phosphohydrolase id=24519186 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
PAS/PAC sensor-containing diguanylate cyclase
13_1_40cm_3_scaffold_428_18
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

14288..15109
DNA (822bp) protein (274aa)
Response regulator n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYK8_BREDI
Signal transduction response regulator {ECO:0000313|EMBL:CDR34226.1}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
13_1_40cm_3_scaffold_428_19
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

15106..16167
DNA (1062bp) protein (354aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH69_THET1
PBS lyase HEAT domain-containing protein repeat-containing protein
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:ACZ43090.1}; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC B
13_1_40cm_3_scaffold_428_20
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16164..18245
DNA (2082bp) protein (694aa)
Glycosyl transferase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RP36_BLASD
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:CCG02697.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain D
13_1_40cm_3_scaffold_428_21
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18322..19572
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FR68_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIC61564.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
LVIVD repeat-containing protein
13_1_40cm_3_scaffold_428_22
unknown

Not on your lists

comp(19653..20036)
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_40cm_3_scaffold_428_23
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20131..21090)
DNA (960bp) protein (320aa)
Hypothetical membrane protein id=3719104 bin=GWF2_Methylomirabilis_70_14 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical membrane protein Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_3_scaffold_428_24
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(21146..22378)
DNA (1233bp) protein (411aa)
Membrane dipeptidase (EC:3.4.13.19); K01273 membrane dipeptidase [EC:3.4.13.19] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
putative dipeptidase (EC:3.4.13.-)
Putative dipeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE84_GEMAT
13_1_40cm_3_scaffold_428_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22427..22948
DNA (522bp) protein (174aa)
(2Fe-2S)-binding domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5B6_9CHLR
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ferredoxin:(2Fe-2S)-binding protein
13_1_40cm_3_scaffold_428_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22938..24320
DNA (1383bp) protein (461aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
pth:PTH_1538 CoxL; aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs id=1247861 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
Displaying 26 items

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