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13_1_40cm_3_scaffold_5398

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_5398_1
unknown

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2..130
DNA (129bp) protein (43aa)

This feature has no annotations

13_1_40cm_3_scaffold_5398_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(659..928)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA48_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_3_scaffold_5398_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1030..1302
DNA (273bp) protein (91aa)
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_3_scaffold_5398_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1299..1982
DNA (684bp) protein (228aa)
DSBA oxidoreductase n=2 Tax=Chloroflexus RepID=A9WGR1_CHLAA
putative oxidoreductase Tax=RBG_16_Gemmatimonadetes_66_8_curated
DSBA oxidoreductase
13_1_40cm_3_scaffold_5398_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1982..2452
DNA (471bp) protein (157aa)
Vitamin K epoxide reductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2P1_CONWI
vitamin K epoxide reductase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
vitamin K epoxide reductase
13_1_40cm_3_scaffold_5398_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2388..4334)
DNA (1947bp) protein (649aa)
acs; acetyl-coenzyme A synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Acetyl-coenzyme A synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ACSA_GEMAT rbh
Acetyl-coenzyme A synthetase
13_1_40cm_3_scaffold_5398_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

4502..4843
DNA (342bp) protein (114aa)
Anti-sigma factor antagonist n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FI22_DESAA
anti-sigma-factor antagonist
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_3_scaffold_5398_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4858..5220
DNA (363bp) protein (121aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1V3_DESTA id=5223401 bin=16ft_combo_ws3_JS1 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
two-component response regulator protein; K15012 two-component system, response regulator RegA Tax=RBG_16_Gemmatimonadetes_66_8_curated
two component sigma-54 specific Fis family transcriptional regulator
13_1_40cm_3_scaffold_5398_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

5207..5863
DNA (657bp) protein (219aa)
Cytochrome ABC transporter ATP-binding component n=1 Tax=Adlercreutzia equolifaciens DSM 19450 RepID=S6CE22_9ACTN
heme ABC exporter, ATP-binding protein CcmA; K09687 antibiotic transport system ATP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
cytochrome ABC transporter ATP-binding component
13_1_40cm_3_scaffold_5398_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

5850..6536
DNA (687bp) protein (229aa)
Heme exporter protein CcmB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA42_GEMAT
ccmB; heme exporter protein CcmB; K02194 heme exporter protein B Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cytochrome c-type biogenesis protein CcmB
13_1_40cm_3_scaffold_5398_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6533..7216
DNA (684bp) protein (228aa)
Heme exporter protein CcmC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA41_GEMAT
ccmC; heme exporter protein CcmC; K02195 heme exporter protein C Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome c assembly protein
13_1_40cm_3_scaffold_5398_12
unknown

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7209..7331
DNA (123bp) protein (41aa)

This feature has no annotations

13_1_40cm_3_scaffold_5398_13
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7293..7847)
DNA (555bp) protein (185aa)
Tax=BJP_IG2102_Gammaproteobacteria_62_140
13_1_40cm_3_scaffold_5398_14
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

7890..8150
DNA (261bp) protein (87aa)
uroporphyrin-III C-methyltransferase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUK4_RUBXD
Displaying 14 items

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